RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SH3KBP1Q96B97 665 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 OR6C1Q96RD1 312 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 EPB41L1Q9H4G0 881 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 SARS2Q9NP81 518 aaKnown RBP9.21□□□□□ -0.94
NUP43-204ENST00000403890 UBE2TQ9NPD8 197 aaPredicted RBP9.21□□□□□ -0.94
NUP43-204ENST00000403890 LHX9Q9NQ69 397 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 TMEM248Q9NWD8 314 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 OR12D3Q9UGF7 316 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 SLC17A4Q9Y2C5 497 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 PLEKHM1Q9Y4G2 1056 aa9.21□□□□□ -0.94
NUP43-204ENST00000403890 GOLGA6L3A6NEY3 463 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 RASA4BC9J798 803 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 RASA4O43374 803 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 ZG16O60844 167 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 SPAG6O75602 509 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 CMA1P23946 247 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 PTGER4P35408 488 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 POLD2P49005 469 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 EPHA4P54764 986 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 RPS15P62841 145 aaKnown RBP9.2□□□□□ -0.94
NUP43-204ENST00000403890 TESK1Q15569 626 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
NUP43-204ENST00000403890 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
NUP43-204ENST00000403890 SYVN1Q86TM6 617 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 FAM131BQ86XD5 332 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 ZSWIM9Q86XI8 627 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 CAMK1DQ8IU85 385 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 FDCSPQ8NFU4 85 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 SCARF2Q96GP6 870 aaPredicted RBP9.2□□□□□ -0.94
NUP43-204ENST00000403890 ELMO2Q96JJ3 720 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 EXOC2Q96KP1 924 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 OR2M4Q96R27 311 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 TUBGCP5Q96RT8 1024 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 NUDT9Q9BW91 350 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 STN1Q9H668 368 aaKnown RBP9.2□□□□□ -0.94
NUP43-204ENST00000403890 KCTD5Q9NXV2 234 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 TMEM63CQ9P1W3 806 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 LHX3Q9UBR4 397 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
NUP43-204ENST00000403890 AKAP9Q99996 3911 aa9.2□□□□□ -0.94
NUP43-204ENST00000403890 SSU72P8A0A1W2PR75 194 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 A6NL46 340 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 A8MX80 341 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 PLEKP08567 350 aaPredicted RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 FGF5P12034 268 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 LPOP22079 712 aaPredicted RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 USP8P40818 1118 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 PRCPP42785 496 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 SYKP43405 635 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 RPS18P62269 152 aaKnown RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 POLR2LP62875 67 aaKnown RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 CDK3Q00526 305 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 NRG1Q02297 640 aaPredicted RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 CYTH1Q15438 398 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUP43-204ENST00000403890 PTPN20Q4JDL3 420 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 MANEALQ5VSG8 457 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 DPPA4Q7L190 304 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 PPP1R3BQ86XI6 285 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 PAF1Q8N7H5 531 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 NUS1Q96E22 293 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 C9orf72Q96LT7 481 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 COQ10AQ96MF6 247 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 SMAD5Q99717 465 aaKnown RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 BARD1Q99728 777 aaKnown RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 KLC2Q9H0B6 622 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 BRD8Q9H0E9 1235 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 ATP13A3Q9H7F0 1226 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 LATS2Q9NRM7 1088 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 GPR83Q9NYM4 423 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 COPG2Q9UBF2 871 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 CFAP45Q9UL16 551 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 FARSAQ9Y285 508 aaKnown RBP9.19□□□□□ -0.94
NUP43-204ENST00000403890 B3GNT3Q9Y2A9 372 aa9.19□□□□□ -0.94
NUP43-204ENST00000403890 FAM72CH0Y354 149 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 ZNF185O15231 689 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 TOX3O15405 576 aaPredicted RBP9.18□□□□□ -0.94
NUP43-204ENST00000403890 MAN1A2O60476 641 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 LRIG2O94898 1065 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 EML2O95834 649 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 C9P02748 559 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 SERPINA4P29622 427 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 ADRA1BP35368 520 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 KRT9P35527 623 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 SCNN1AP37088 669 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 PTGIRP43119 386 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 SEPHS1P49903 392 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 PMS1P54277 932 aaKnown RBP9.18□□□□□ -0.94
NUP43-204ENST00000403890 LRRC63Q05C16 580 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 MN1Q10571 1320 aaPredicted RBP9.18□□□□□ -0.94
NUP43-204ENST00000403890 IL10RAQ13651 578 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 LRP8Q14114 963 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 PYCR3Q53H96 274 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 FAM72AQ5TYM5 149 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 FOXD4L5Q5VV16 416 aaPredicted RBP9.18□□□□□ -0.94
NUP43-204ENST00000403890 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 FAM72DQ6L9T8 149 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 IYDQ6PHW0 289 aa9.18□□□□□ -0.94
NUP43-204ENST00000403890 DOK6Q6PKX4 331 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms