RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ABCC13Q9NSE7 274 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 CCM2LQ9NUG4 571 aaPredicted RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 RNF112Q9ULX5 631 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 PRG3Q9Y2Y8 225 aaPredicted RBP11.94□□□□□ -0.5
RBM39-206ENST00000403542 FADS3Q9Y5Q0 445 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 USP34Q70CQ2 3546 aa11.94□□□□□ -0.5
RBM39-206ENST00000403542 LDB2O43679 373 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 RHOBTB1O94844 696 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 CAPNS1P04632 268 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 MTHFD2P13995 350 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 GSK3BP49841 420 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 IST1P53990 364 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 TIAL1Q01085 375 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 17.9
RBM39-206ENST00000403542 LIPEQ05469 1076 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 PIGFQ07326 219 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 BNIP3Q12983 259 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 GNASQ5JWF2 1037 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 C9orf131Q5VYM1 1079 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 TIGD7Q6NT04 549 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 KLHDC9Q8NEP7 349 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 KCTD14Q9BQ13 255 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 BPIFA1Q9NP55 256 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 TIMMDC1Q9NPL8 285 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 CNOT11Q9UKZ1 510 aaKnown RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 SARDHQ9UL12 918 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 SLC8A2Q9UPR5 921 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 NPEPPSL1A6NEC2 478 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 J3QRK9 145 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 FGF10O15520 208 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 CHRNA1P02708 482 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 MLLT6P55198 1093 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 RBBP7Q16576 425 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 LDLRAP1Q5SW96 308 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 CDYL2Q8N8U2 506 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 FBXL8Q96CD0 374 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 SLC30A3Q99726 388 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 ALG2Q9H553 416 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 IQCF5A8MTL0 148 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 BTN3A1O00481 513 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 KCNH1O95259 989 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 BMP2P12643 396 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 ZNF37AP17032 561 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 DNAJB2P25686 324 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 CCR3P51677 355 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 MTPNP58546 118 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 NAA20P61599 178 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 TSPY1Q01534 308 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 CLCQ05315 142 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 FSCN1Q16658 493 aaKnown RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 ANKRD34AQ69YU3 496 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 OGFOD2Q6N063 350 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 SLC2A7Q6PXP3 512 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 KIAA0408Q6ZU52 694 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 RAB44Q7Z6P3 723 aaPredicted RBP11.93□□□□□ -0.5
RBM39-206ENST00000403542 PARP8Q8N3A8 854 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 ANKFN1Q8N957 763 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 ATAD1Q8NBU5 361 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 RMDN1Q96DB5 314 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 SPON2Q9BUD6 331 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 AGPAT4Q9NRZ5 378 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 GMIPQ9P107 970 aa11.93□□□□□ -0.5
RBM39-206ENST00000403542 NYNRINQ9P2P1 1898 aaKnown RBP11.92□□□□□ -0.5
RBM39-206ENST00000403542 A0A0D9SEW6 157 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 OR1I1O60431 355 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 B4GALT3O60512 393 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 KATNA1O75449 491 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 IGLV3-25P01717 112 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 ZNF182P17025 639 aaPredicted RBP11.92□□□□□ -0.5
RBM39-206ENST00000403542 LBPP18428 481 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 THPOP40225 353 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 PSMD8P48556 350 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 PIK3CGP48736 1102 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 MRPS6P82932 125 aaKnown RBP11.92□□□□□ -0.5
RBM39-206ENST00000403542 RAB39AQ14964 217 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 ARTNQ5T4W7 220 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 MANEALQ5VSG8 457 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 GDF6Q6KF10 455 aaPredicted RBP11.92□□□□□ -0.5
RBM39-206ENST00000403542 KCTD8Q6ZWB6 473 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 LRRC43Q8N309 656 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 FBXO39Q8N4B4 442 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 LZTR1Q8N653 840 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 OR10Q1Q8NGQ4 319 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 ACBD6Q9BR61 282 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 ADNPQ9H2P0 1102 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 PRRC2BQ5JSZ5 2229 aaKnown RBP11.92□□□□□ -0.5
RBM39-206ENST00000403542 A0A087WXM4 84 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 ASPDHA6ND91 283 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 MAN1A2O60476 641 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 OR1E1P30953 314 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 DGKQP52824 942 aa11.92□□□□□ -0.5
RBM39-206ENST00000403542 TBX4P57082 545 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms