RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 RBM4Q9BWF3 364 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 C1orf43Q9BWL3 253 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SMG9Q9H0W8 520 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 DEFB129Q9H1M3 183 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CYP3A43Q9HB55 503 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PCDH9Q9HC56 1237 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CATSPERZQ9NTU4 200 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 FBXO28Q9NVF7 368 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ETNK2Q9NVF9 386 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PNPOQ9NVS9 261 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ARHGAP20Q9P2F6 1191 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 THEGQ9P2T0 379 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 KCND3Q9UK17 655 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 TSPAN16Q9UKR8 245 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CDH7Q9ULB5 785 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 GABRQQ9UN88 632 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 GPR55Q9Y2T6 319 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PCDHB6Q9Y5E3 794 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 TCF20Q9UGU0 1960 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ZFHX2Q9C0A1 2572 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 LOC105371267A0A1B0GV96 52 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PRR23D1E9PI22 279 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PSMD11O00231 422 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PRRG1O14668 218 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF197O14709 1029 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 GSTA4O15217 222 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SLC16A3O15427 465 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 AKR7A2O43488 359 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 TNFSF14O43557 240 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CRCPO75575 148 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CLPXO76031 633 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 RASAL1O95294 804 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CH25HO95992 272 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 KRT6BP04259 564 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 TMEM253P0C7T8 217 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PRR23D2P0DMB1 279 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SRCP12931 536 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 AGAP20933 346 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CD1BP29016 333 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PBX3P40426 434 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SLC15A1P46059 708 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 KRT6CP48668 564 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 STAT2P52630 851 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SMSP52788 366 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 EIF3BP55884 814 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 STX17P56962 302 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 AIMP2Q13155 320 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 MSLNQ13421 630 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SNTB2Q13425 540 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 FAM83EQ2M2I3 478 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 RGS21Q2M5E4 152 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 FAM98BQ52LJ0 330 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PITRM1Q5JRX3 1037 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SAPCD1Q5SSQ6 148 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 THEM4Q5T1C6 240 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 DAB2IPQ5VWQ8 1189 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 MTSS1LQ765P7 747 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 HEATR3Q7Z4Q2 680 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 TMC3Q7Z5M5 1100 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ASPGQ86U10 573 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ZZZ3Q8IYH5 903 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 HACE1Q8IYU2 909 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ICA1LQ8NDH6 482 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 STEAP2Q8NFT2 490 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 OR13H1Q8NG92 308 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 OR8J1Q8NGP2 316 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 OR52J3Q8NH60 311 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 FBXW5Q969U6 566 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 RHBDF1Q96CC6 855 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 NMD3Q96D46 503 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 MED30Q96HR3 178 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 FBXL20Q96IG2 436 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 NR1H4Q96RI1 486 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 IMPG2Q9BZV3 1241 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 UBE2OQ9C0C9 1292 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ADAM7Q9H2U9 754 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SMURF1Q9HCE7 757 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 MRPL47Q9HD33 250 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CNNM1Q9NRU3 951 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 DNAJC11Q9NVH1 559 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ZSCAN32Q9NX65 697 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 BARHL2Q9NY43 387 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 LRIT1Q9P2V4 623 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 COPG2Q9UBF2 871 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 SLCO3A1Q9UIG8 710 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 LEF1Q9UJU2 399 aaPredicted RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 GGA1Q9UJY5 639 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 GMEB2Q9UKD1 530 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CBLCQ9ULV8 474 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 RNF112Q9ULX5 631 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PLAGL2Q9UPG8 496 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF510Q9Y2H8 683 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 HBS1LQ9Y450 684 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PCDHB1Q9Y5F3 818 aa3.93□□□□□ -1.78
CLHC1-201ENST00000401408 CFAP20Q9Y6A4 193 aaKnown RBP3.93□□□□□ -1.78
CLHC1-201ENST00000401408 PTPRFP10586 1907 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms