RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 HMGB4Q8WW32 186 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 DNAJA3Q96EY1 480 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 KCNN2Q9H2S1 579 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 L1RE1Q9UN81 338 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PSMG1O95456 288 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 MLYCDO95822 493 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PTNP21246 168 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 GNALP38405 381 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 NAE1Q13564 534 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 KYAT3Q6YP21 454 aaKnown RBP13.72□□□□□ -0.21
VAPA-202ENST00000400000 HAS1Q92839 578 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PPM1MQ96MI6 270 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 YIPF4Q9BSR8 244 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 DEC1Q9P2X7 70 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 G3V2T6 193 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 GRM6O15303 877 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 ZNF8P17098 575 aaPredicted RBP13.72□□□□□ -0.21
VAPA-202ENST00000400000 WNT3AP56704 352 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 INHBEP58166 350 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 KCTD8Q6ZWB6 473 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 GPR180Q86V85 440 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 SPATA22Q8NHS9 363 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 STARD8Q92502 1023 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 DSN1Q9H410 356 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PNO1Q9NRX1 252 aaKnown RBP13.72□□□□□ -0.21
VAPA-202ENST00000400000 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 CFAP20Q9Y6A4 193 aaKnown RBP13.72□□□□□ -0.21
VAPA-202ENST00000400000 CCDC182A6NF36 153 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PDE9AO76083 593 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 MPP1Q00013 466 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 SLC8B1Q6J4K2 584 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 COPS8Q99627 209 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 GLYATL1P3A0A0U1RQE8 302 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 RGS20O76081 388 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 INHAP05111 366 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 FCER2P06734 321 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 SPPL2CQ8IUH8 684 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 ELOA2Q8IYF1 753 aaPredicted RBP13.72□□□□□ -0.21
VAPA-202ENST00000400000 OR7A2PQ8NGA2 310 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 UBE2E3Q969T4 207 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 SLCO1B3Q9NPD5 702 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 SLC17A7Q9P2U7 560 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 RPS6KA6Q9UK32 745 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PER2O15055 1255 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 FMO1Q01740 532 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 C17orf64Q86WR6 236 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 ZNF366Q8N895 744 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 HNRNPLLQ8WVV9 542 aaKnown RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 AZIN2Q96A70 460 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 TRAPPC9Q96Q05 1148 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 RAI2Q9Y5P3 530 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 FPGTO14772 594 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 SMAD9O15198 467 aaKnown RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 PRLRP16471 622 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 GNPDA1P46926 289 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 DGKEP52429 567 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 ITGA1P56199 1179 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 ITCHQ96J02 903 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 DUSP16Q9BY84 665 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 MORF4L1Q9UBU8 362 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 ERGIC3Q9Y282 383 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 UGT2B17O75795 530 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 OTCP00480 354 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 CLCN5P51795 746 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 BNC1Q01954 994 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 CDK18Q07002 472 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 ADRM1Q16186 407 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 VITQ6UXI7 678 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 LRRC49Q8IUZ0 686 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 PJA1Q8NG27 643 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 TBX5Q99593 518 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 H3BM21 787 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 STX11O75558 287 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 RECQL5O94762 991 aaPredicted RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 CDK14O94921 469 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 HSPA7P48741 367 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 SLC5A3P53794 718 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 ATXN1P54253 815 aaKnown RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 CREMQ03060 361 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 AP2M1Q96CW1 435 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 SLC38A3Q99624 504 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 SPAG4Q9NPE6 437 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 GDF3Q9NR23 364 aa13.71□□□□□ -0.21
VAPA-202ENST00000400000 LEF1Q9UJU2 399 aaPredicted RBP13.71□□□□□ -0.21
VAPA-202ENST00000400000 PITRM1Q5JRX3 1037 aa13.71□□□□□ -0.22
VAPA-202ENST00000400000 TTC23Q5W5X9 447 aa13.71□□□□□ -0.22
VAPA-202ENST00000400000 FRRS1Q6ZNA5 592 aa13.71□□□□□ -0.22
VAPA-202ENST00000400000 CHSY3Q70JA7 882 aa13.71□□□□□ -0.22
VAPA-202ENST00000400000 ATCAYQ86WG3 371 aa13.71□□□□□ -0.22
VAPA-202ENST00000400000 ADAMTS15Q8TE58 950 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms