RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 JCHAINP01591 159 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 MAGEA12P43365 314 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 SCIMPQ6UWF3 145 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 HS3ST5Q8IZT8 346 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CTRCQ99895 268 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CHID1Q9BWS9 393 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 RHOJQ9H4E5 214 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 SMURF2Q9HAU4 748 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 LOC285556D6RIA3 1793 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 GABBR2O75899 941 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CTSHP09668 335 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 GFAPP14136 432 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 FSHRP23945 695 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 KCNC4Q03721 635 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 ANKRD34AQ69YU3 496 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 ZNF470Q6ECI4 717 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 UGT3A1Q6NUS8 523 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 IPMKQ8NFU5 416 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 RDH11Q8TC12 318 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CELF6Q96J87 481 aaKnown RBP17.03■□□□□ 0.32
PTPRA-205ENST00000399903 KLHL3Q9UH77 587 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 B3GNT3Q9Y2A9 372 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 ZFC3H1O60293 1989 aaKnown RBP17.03■□□□□ 0.32
PTPRA-205ENST00000399903 ABCB7O75027 752 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 SEC24AO95486 1093 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 SLC4A1P02730 911 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 BMP4P12644 408 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CAPN3P20807 821 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 MRPS15P82914 257 aaKnown RBP17.03■□□□□ 0.32
PTPRA-205ENST00000399903 PYCR3Q53H96 274 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 PLEKHG7Q6ZR37 379 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CTU1Q7Z7A3 348 aaKnown RBP17.03■□□□□ 0.32
PTPRA-205ENST00000399903 SPARTQ8N0X7 666 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 KHSRPQ92945 711 aaKnown RBP eCLIP17.03■□□□□ 0.321e-7■■■■□ 24.1
PTPRA-205ENST00000399903 ZFP42Q96MM3 310 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 GPR22Q99680 433 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 ABHD16BQ9H3Z7 469 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.03■□□□□ 0.32
PTPRA-205ENST00000399903 ANKMY1Q9P2S6 941 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 LRRC37A2A6NM11 1700 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 EEF2KO00418 725 aaKnown RBP17.02■□□□□ 0.32
PTPRA-205ENST00000399903 PPP6CO00743 305 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 SEC14L2O76054 403 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 ALOX5P09917 674 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 PSMB9P28065 219 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 AFF1P51825 1210 aaKnown RBP17.02■□□□□ 0.32
PTPRA-205ENST00000399903 HUNKP57058 714 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 LAPTM5Q13571 262 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 XAF1Q6GPH4 301 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 TMEM135Q86UB9 458 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 ABI1Q8IZP0 508 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 SPATA22Q8NHS9 363 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 ITCHQ96J02 903 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 TDRD1Q9BXT4 1180 aaKnown RBP17.02■□□□□ 0.32
PTPRA-205ENST00000399903 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 ASB7Q9H672 318 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 EML4Q9HC35 981 aaKnown RBP17.02■□□□□ 0.32
PTPRA-205ENST00000399903 MAP10Q9P2G4 905 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 SPO11Q9Y5K1 396 aa17.02■□□□□ 0.32
PTPRA-205ENST00000399903 ALDOCP09972 364 aaKnown RBP17.02■□□□□ 0.31
PTPRA-205ENST00000399903 ATP5F1P24539 256 aaPredicted RBP17.02■□□□□ 0.31
PTPRA-205ENST00000399903 TGFBR1P36897 503 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 AGAP7PQ5VUJ5 663 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 PPP2R2DQ66LE6 453 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 ESRP1Q6NXG1 681 aaKnown RBP17.02■□□□□ 0.31
PTPRA-205ENST00000399903 LCLAT1Q6UWP7 414 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 OTOP3Q7RTS5 596 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 TLK2Q86UE8 772 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 GATAD2AQ86YP4 633 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 C8orf59Q8N0T1 100 aaPredicted RBP17.02■□□□□ 0.31
PTPRA-205ENST00000399903 PDPRQ8NCN5 879 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 MYRFLQ96LU7 910 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 AKTIPQ9H8T0 292 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 PRDM8Q9NQV8 689 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 ANKRD6Q9Y2G4 727 aa17.02■□□□□ 0.31
PTPRA-205ENST00000399903 TIMM13Q9Y5L4 95 aaPredicted RBP17.02■□□□□ 0.31
PTPRA-205ENST00000399903 EIF3FO00303 357 aaPredicted RBP17.01■□□□□ 0.31
PTPRA-205ENST00000399903 XPNPEP2O43895 674 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 RFC2P35250 354 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 GSK3BP49841 420 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 LIPEQ05469 1076 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 GRSF1Q12849 480 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPRA-205ENST00000399903 GRB14Q14449 540 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 SPRYD7Q5W111 196 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 TAF2Q6P1X5 1199 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 DEFB106AQ8N104 65 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 SCML4Q8N228 414 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 ALG9Q9H6U8 611 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 SLC2A6Q9UGQ3 507 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 PCDHB3Q9Y5E6 796 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 SIP14410 1827 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 AQP12BA6NM10 295 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 A8MV72 311 aaPredicted RBP17.01■□□□□ 0.31
PTPRA-205ENST00000399903 CRCPO75575 148 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 LINC00032P0C843 101 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 PTPN3P26045 913 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 AXLP30530 894 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms