RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 NOD1Q9Y239 953 aa25.51■■□□□ 1.67
COL13A1-203ENST00000398969 CCDC162PA2VCL2 907 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 SAC3D1A6NKF1 404 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 C9JVG2 144 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 HSD17B1P14061 328 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 GPR15P49685 360 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 ACLYP53396 1101 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 ILF2Q12905 390 aaKnown RBP25.5■■□□□ 1.67
COL13A1-203ENST00000398969 MRNIPQ6NTE8 343 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 SPPL2CQ8IUH8 684 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 HM13Q8TCT9 377 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 SEMA3CQ99985 751 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 TIMMDC1Q9NPL8 285 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 CMTM6Q9NX76 183 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 AURKCQ9UQB9 309 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 SQORQ9Y6N5 450 aa25.5■■□□□ 1.67
COL13A1-203ENST00000398969 DHRS12A0PJE2 317 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 MATN4O95460 622 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 TUBA4AP68366 448 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 DSC3Q14574 896 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 FBXL22Q6P050 247 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 PACRGLQ8N7B6 248 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 FAM47BQ8NA70 645 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 DRAXINQ8NBI3 349 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-203ENST00000398969 TRPC4APQ8TEL6 797 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 SDR39U1Q9NRG7 319 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-203ENST00000398969 EGFL7Q9UHF1 273 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 PCDHB8Q9UN66 801 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 HNRNPRO43390 633 aaKnown RBP25.49■■□□□ 1.67
COL13A1-203ENST00000398969 IL10RBQ08334 325 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 EFEMP1Q12805 493 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 CAPRIN1Q14444 709 aaKnown RBP25.49■■□□□ 1.67
COL13A1-203ENST00000398969 DDR2Q16832 855 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 MFSD2AQ8NA29 543 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 OR13C4Q8NGS5 318 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 FAM81AQ8TBF8 368 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 PEX13Q92968 403 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 TUBGCP3Q96CW5 907 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 TFB2MQ9H5Q4 396 aaKnown RBP25.49■■□□□ 1.67
COL13A1-203ENST00000398969 CLK4Q9HAZ1 481 aaKnown RBP25.49■■□□□ 1.67
COL13A1-203ENST00000398969 GMIPQ9P107 970 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 POLG2Q9UHN1 485 aa25.49■■□□□ 1.67
COL13A1-203ENST00000398969 RPP40O75818 363 aaKnown RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 CDK4P11802 303 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 LBPP18428 481 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 SLC6A2P23975 617 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 YBX1P67809 324 aaKnown RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 BNIP2Q12982 314 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 INPP5AQ14642 412 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 TRIM71Q2Q1W2 868 aaKnown RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 INTS11Q5TA45 600 aaKnown RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 LCN8Q6JVE9 175 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 EPHX4Q8IUS5 362 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 CBR4Q8N4T8 237 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 ADAM2Q99965 735 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 AGPAT4Q9NRZ5 378 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 SLC8A2Q9UPR5 921 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 LINC00032P0C843 101 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 GFAPP14136 432 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 HGFP14210 728 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 CHRM3P20309 590 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 CDK9P50750 372 aaKnown RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 PLOD1Q02809 727 aaPredicted RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 POLD3Q15054 466 aaPredicted RBP25.48■■□□□ 1.67
COL13A1-203ENST00000398969 RAP1GAP2Q684P5 730 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 RAET1EQ8TD07 263 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 FEM1CQ96JP0 617 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 BTRCQ9Y297 605 aa25.48■■□□□ 1.67
COL13A1-203ENST00000398969 DLGAP1O14490 977 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 RAMP2O60895 175 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 CLASP2O75122 1294 aaKnown RBP25.47■■□□□ 1.67
COL13A1-203ENST00000398969 FGF1P05230 155 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 UGT1A6P19224 532 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 HLA-DPA1P20036 260 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 HPCAP84074 193 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 GALNT3Q14435 633 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 FAM26DQ5JW98 314 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 CIR1Q86X95 450 aaPredicted RBP25.47■■□□□ 1.67
COL13A1-203ENST00000398969 CAMK1DQ8IU85 385 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 ATP6V0D2Q8N8Y2 350 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 DIS3LQ8TF46 1054 aaKnown RBP25.47■■□□□ 1.67
COL13A1-203ENST00000398969 LRRC58Q96CX6 371 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 AARSD1Q9BTE6 412 aaKnown RBP25.47■■□□□ 1.67
COL13A1-203ENST00000398969 POLR1EQ9GZS1 481 aaKnown RBP25.47■■□□□ 1.67
COL13A1-203ENST00000398969 SLC52A3Q9NQ40 469 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 CATSPERZQ9NTU4 200 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 GID8Q9NWU2 228 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 ACTR3BQ9P1U1 418 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 PLXNA3P51805 1871 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 A0A1B0GTL3 188 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 MUSKO15146 869 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 PSMA4P25789 261 aaKnown RBP25.47■■□□□ 1.67
COL13A1-203ENST00000398969 PBX3P40426 434 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 SERINC3Q13530 473 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 GOLM1Q8NBJ4 401 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 BTN2A3PQ96KV6 586 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 FBXO44Q9H4M3 255 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 CREBZFQ9NS37 354 aa25.47■■□□□ 1.67
COL13A1-203ENST00000398969 SMOXQ9NWM0 555 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms