RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZFP37Q9Y6Q3 630 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 LRRC72A6NJI9 287 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 SNPHO15079 494 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 CLDN11O75508 207 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 SASH3O75995 380 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 MED26O95402 600 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 ZNF865P0CJ78 1059 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 ERCC2P18074 760 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC25A3Q00325 362 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 ZNF549Q6P9A3 640 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 GPRIN3Q6ZVF9 776 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 CIR1Q86X95 450 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 DIABLOQ9NR28 239 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 PSMD13Q9UNM6 376 aa14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 MRPS7Q9Y2R9 242 aaKnown RBP14.21□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC28A1O00337 649 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 TIE1P35590 1138 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 FNBP1LQ5T0N5 605 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 CREG2Q8IUH2 290 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 HID1Q8IV36 788 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 DEFB119Q8N690 84 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 ADCY4Q8NFM4 1077 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 IRGQQ8WZA9 623 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 PAIP1Q9H074 479 aaKnown RBP14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 FZD8Q9H461 694 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 SPEF2Q9C093 1822 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 PSMD11O00231 422 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 MATN4O95460 622 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 ERBB2P04626 1255 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 HOXB8P17481 243 aaPredicted RBP14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 KLHL12Q53G59 568 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 AKIRIN2Q53H80 203 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 TAPT1Q6NXT6 567 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 SH3RF1Q7Z6J0 888 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 PLD4Q96BZ4 506 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 SLC38A3Q99624 504 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 GINS4Q9BRT9 223 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 B3GNT5Q9BYG0 378 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 CEP44Q9C0F1 390 aa14.21□□□□□ -0.14
PCDHA11-201ENST00000398640 COL22A1Q8NFW1 1626 aaPredicted RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ATP6AP2A0A1C7CYW4 349 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 SLC28A2O43868 658 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ATP6AP2O75787 350 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 HGFP14210 728 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ITPKAP23677 461 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 MATKP42679 507 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 CTSOP43234 321 aaPredicted RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 C2orf27AQ580R0 203 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 UBE2R2Q712K3 238 aaPredicted RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ZNF248Q8NDW4 579 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 AENQ8WTP8 325 aaKnown RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 B3GALT6Q96L58 329 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 COPS8Q99627 209 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 KCNS3Q9BQ31 491 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 KLHL31Q9H511 634 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 CAB39LQ9H9S4 337 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 CDC42P60953 191 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 SPIBQ01892 262 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 C4orf32Q8N8J7 132 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 C5P01031 1676 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 C15orf38-AP3S2A0A0A6YYH1 394 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 NPEPPSL1A6NEC2 478 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 H3BM21 787 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 DGKGP49619 791 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ARPINQ7Z6K5 226 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 NEK7Q8TDX7 302 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 LRRC39Q96DD0 335 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 MCMBPQ9BTE3 642 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 CLEC4MQ9H2X3 399 aaPredicted RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 TOP3BO95985 862 aaKnown RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ATP5F1P24539 256 aaPredicted RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 WASHC2DQ5SRD0 308 aa14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 AARSD1Q9BTE6 412 aaKnown RBP14.2□□□□□ -0.14
PCDHA11-201ENST00000398640 ATG13O75143 517 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 SNRPB2P08579 225 aaKnown RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 FMO1Q01740 532 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 SQLEQ14534 574 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 LRRC49Q8IUZ0 686 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 C8orf59Q8N0T1 100 aaPredicted RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 PANX1Q96RD7 426 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 ARHGEF4Q9NR80 690 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 A0A1W2PRU2 124 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 ADSLP30566 484 aaPredicted RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 CDK18Q07002 472 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 RHOBTB2Q9BYZ6 727 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 NOL6Q9H6R4 1146 aaKnown RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 MRPS33Q9Y291 106 aaKnown RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 ENPP3O14638 875 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 OR10H3O60404 316 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 IDSP22304 550 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 CXCR3P49682 368 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 C1orf127Q8N9H9 656 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 FEM1CQ96JP0 617 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 FNDC11Q9BVV2 318 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 HBS1LQ9Y450 684 aaKnown RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 CPED1A4D0V7 1026 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 RECQL5O94762 991 aaPredicted RBP14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 SLC11A1P49279 550 aa14.19□□□□□ -0.14
PCDHA11-201ENST00000398640 MEA1Q16626 185 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms