RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 DNAH12Q6ZR08 3092 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 FFAR3O14843 346 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 GPR42O15529 346 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 MAGEA3P43357 314 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 KCNQ1P51787 676 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 FOXA1P55317 472 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 SEMG2Q02383 582 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 HERC3Q15034 1050 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 ADRM1Q16186 407 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 TECRLQ5HYJ1 363 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 FAM43BQ6ZT52 329 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-202ENST00000398417 FNDC5Q8NAU1 212 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 OR4K2Q8NGD2 314 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 DTNBP1Q96EV8 351 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 ASIC4Q96FT7 647 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 DPY30Q9C005 99 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 TMEM30AQ9NV96 361 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 PKD2L2Q9NZM6 624 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 TEKT2Q9UIF3 430 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF318Q5VUA4 2279 aa4.92□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF195O14628 629 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HNRNPRO43390 633 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 NR1H2P55055 460 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 C16orf72Q14CZ0 275 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MS4A13Q5J8X5 152 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SAMD4BQ5PRF9 694 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 RNF219Q5W0B1 726 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 DENND5AQ6IQ26 1287 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 AFTPHQ6ULP2 937 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CENPLQ8N0S6 344 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LILRA2Q8N149 483 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ARHGAP39Q9C0H5 1083 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SPAG4Q9NPE6 437 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SLAMF7Q9NQ25 335 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 EIF2B4Q9UI10 523 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CRLS1Q9UJA2 301 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 EIF3LQ9Y262 564 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PCDHGA7Q9Y5G6 932 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SIPA1L3O60292 1781 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SMIM31A0A1B0GVY4 71 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PRR23AA6NEV1 266 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ZBTB11O95625 1053 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SERPINF2P08697 491 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 FAM163BP0C2L3 166 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PKMP14618 531 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CD1DP15813 335 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LIPEQ05469 1076 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PLD1Q13393 1074 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HNRNPDQ14103 355 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ARMC3Q5W041 872 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ZFP1Q6P2D0 407 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PAQR3Q6TCH7 311 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SYVN1Q86TM6 617 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 METTL6Q8TCB7 284 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MOAP1Q96BY2 351 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 DGCR14Q96DF8 476 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LRCH3Q96II8 777 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TSPAN18Q96SJ8 248 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ING2Q9H160 280 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MFSD1Q9H3U5 465 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 OSER1Q9NX31 292 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TRPM5Q9NZQ8 1165 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 RAB26Q9ULW5 256 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SNX5Q9Y5X3 404 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 BRWD3Q6RI45 1802 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC154A6NI56 674 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PDLIM1O00151 329 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HSPA1AP0DMV8 641 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HSPA1BP0DMV9 641 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 DPP6P42658 865 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KCNC1P48547 511 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 RPL38P63173 70 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MYBPC1Q00872 1141 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 GPR107Q5VW38 600 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 IL27RAQ6UWB1 636 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 RNF111Q6ZNA4 994 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MON1AQ86VX9 555 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CBR4Q8N4T8 237 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LINGO1Q96FE5 620 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PPP1R2P1Q96PQ5 205 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HBEGFQ99075 208 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 EXO5Q9H790 373 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 EXD2Q9NVH0 621 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ASB3Q9Y575 518 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HEMK1Q9Y5R4 338 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MBLAC1A4D2B0 266 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 C2orf81A6NN90 581 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 FBP2O00757 339 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SLC7A4O43246 635 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ACSL4O60488 711 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ALDH2P05091 517 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TRIM25Q14258 630 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 RABL3Q5HYI8 236 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KLHDC10Q6PID8 442 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 STK32CQ86UX6 486 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PGBD5Q8N414 524 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CLHC1Q8NHS4 586 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 NSMCE2Q96MF7 247 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TMEM74Q96NL1 305 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KATNBL1Q9H079 304 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms