RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 DLG4P78352 724 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 FMO1Q01740 532 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 RAD51Q06609 339 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ACVR2BQ13705 512 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.58□□□□□ -1.366e-7■■□□□ 13
TM9SF4-202ENST00000398022 GALNTL6Q49A17 601 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 C10orf120Q5SQS8 335 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MARCH8Q5T0T0 291 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ATAD3BQ5T9A4 648 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 FOXB2Q5VYV0 432 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 CES4AQ5XG92 561 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 VSTM1Q6UX27 236 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 CHSY3Q70JA7 882 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ADGRG6Q86SQ4 1221 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DCP1BQ8IZD4 617 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 PLD6Q8N2A8 252 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 OXR1Q8N573 874 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MINDY2Q8NBR6 621 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DDX1Q92499 740 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MYDGFQ969H8 173 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 KCNJ15Q99712 375 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MCOLN1Q9GZU1 580 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 RIMS4Q9H426 269 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MOV10Q9HCE1 1003 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ARHGEF3Q9NR81 526 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DNAJC17Q9NVM6 304 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 GMPPBQ9Y5P6 360 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 SH3PXD2BA1X283 911 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 OR6C70A6NIJ9 312 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 PQBP1O60828 265 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ULK1O75385 1050 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ERAL1O75616 437 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 UNC5CO95185 931 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ABHD2P08910 425 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ZCCHC18P0CG32 403 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 CHRNB2P17787 502 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 GTF2H1P32780 548 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 HTR7P34969 479 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MAGEA4P43358 317 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 QARSP47897 775 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 GNG10P50151 68 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DMP1Q13316 513 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 LLGL1Q15334 1064 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 SNRNP35Q16560 246 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC9B1Q4ZJI4 515 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 IZUMO3Q5VZ72 239 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TAF8Q7Z7C8 310 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ZFPM1Q8IX07 1006 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ZBED8Q8IZ13 594 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 BANPQ8N9N5 519 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 RBBP8NLQ8NC74 664 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 HMCESQ96FZ2 354 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MYRFLQ96LU7 910 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TOX2Q96NM4 488 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 DHRS4Q9BTZ2 278 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 COPS7BQ9H9Q2 264 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ZMYM5Q9UJ78 669 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MRPS7Q9Y2R9 242 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ENTPD3O75355 529 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TADA2AO75478 443 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 SERPINI2O75830 405 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 UPP2O95045 317 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 COX5BP10606 129 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 HOXB3P14651 431 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 CLEC16AQ2KHT3 1053 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MANEAQ5SRI9 462 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 PXDC1Q5TGL8 231 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 KLHL35Q6PF15 583 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 RHOT1Q8IXI2 618 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM217AQ8IXS0 508 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TMEM174Q8WUU8 243 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 KIAA1191Q96A73 305 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TRNT1Q96Q11 434 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 MXRA8Q9BRK3 442 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 TINAGL1Q9GZM7 467 aaPredicted RBP6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 CLPBQ9H078 707 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 PKD2L1Q9P0L9 805 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 ANKRD6Q9Y2G4 727 aa6.58□□□□□ -1.36
TM9SF4-202ENST00000398022 A0A0C4DFX4 3053 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 MTMR11A4FU01 709 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 EFCAB10A6NFE3 127 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 OR6C75A6NL08 312 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 KIAA0355O15063 1070 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PSTPIP1O43586 416 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 STAU1O95793 577 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 IL1AP01583 271 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 NR2F1P10589 423 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 DBTP11182 482 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 BMP1P13497 986 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ALDH7A1P49419 539 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 EMP3P54852 163 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RPS3AP61247 264 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 XIAPP98170 497 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 STX3Q13277 289 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SNTA1Q13424 505 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 NAB1Q13506 487 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 DDX39BQ13838 428 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SIX1Q15475 284 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms