RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 WHAMMP3Q1A5X7 153 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 ADAMTSL4Q6UY14 1074 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 MICALCLQ6ZW33 695 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 ZNF572Q7Z3I7 529 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 PLEKHG4BQ96PX9 1271 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 TRIM31Q9BZY9 425 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 ERVMER34-1Q9H9K5 563 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 PHPT1Q9NRX4 125 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 RAD18Q9NS91 495 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 KLF15Q9UIH9 416 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 FKBPLQ9UIM3 349 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 GPR39O43194 453 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 SDC3O75056 442 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 AVILO75366 819 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 MYCLP1P12525 358 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 SPAM1P38567 509 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 KIAA1024LP59773 190 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 CRADDP78560 199 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 SYDE1Q6ZW31 735 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 TSACCQ96A04 125 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 DNAJC1Q96KC8 554 aaKnown RBP25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 ZSCAN5AQ9BUG6 496 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 CDH19Q9H159 772 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 TM7SF3Q9NS93 570 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 NFKBIL1Q9UBC1 381 aaPredicted RBP25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 CEP250Q9BV73 2442 aa25.22■■□□□ 1.63
TMEM55B-202ENST00000398020 A0A1B0GTQ1 180 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 SCAMP1O15126 338 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 TEAD1P28347 426 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 ARRB1P49407 418 aaPredicted RBP25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 PDE1BQ01064 536 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 RNASEH2BQ5TBB1 312 aaKnown RBP25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 DOK6Q6PKX4 331 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 RD3Q7Z3Z2 195 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 TRAM1L1Q8N609 369 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 NAT8LQ8N9F0 302 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 WDR92Q96MX6 357 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 ARFGAP3Q9NP61 516 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 MRPL40Q9NQ50 206 aaKnown RBP25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 DNAAF2Q9NVR5 837 aaKnown RBP25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 CNOT6Q9ULM6 557 aaKnown RBP25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 TDRD6O60522 2096 aaKnown RBP25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 CABIN1Q9Y6J0 2220 aa25.21■■□□□ 1.63
TMEM55B-202ENST00000398020 GLYATL1P3A0A0U1RQE8 302 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 DNALI1O14645 258 aaPredicted RBP25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 RAD51CO43502 376 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 PPFIA2O75334 1257 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 IVDP26440 423 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 BNIP3Q12983 259 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 IZUMO3Q5VZ72 239 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 LRRC8BQ6P9F7 803 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 PPIL6Q8IXY8 311 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 RBFAQ8N0V3 343 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 OR56A4Q8NGH8 313 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 PDXPQ96GD0 296 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 HIC2Q96JB3 615 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 TCEAL2Q9H3H9 227 aaPredicted RBP25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 FGF22Q9HCT0 170 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 MOSPD1Q9UJG1 213 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 TMEM98Q9Y2Y6 226 aa25.2■■□□□ 1.63
TMEM55B-202ENST00000398020 GAPDHSO14556 408 aaPredicted RBP25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 CSF2P04141 144 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 PYGLP06737 847 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 MGAT1P26572 445 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 POLD2P49005 469 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 CCT8P50990 548 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 SARNPP82979 210 aaKnown RBP25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 TCEA2Q15560 299 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 CHRNA6Q15825 494 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 ALG11Q2TAA5 492 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 ATP13A5Q4VNC0 1218 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 CAND1Q86VP6 1230 aaKnown RBP25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 GATAD2AQ86YP4 633 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 HID1Q8IV36 788 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 OXR1Q8N573 874 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 PTCD2Q8WV60 388 aaKnown RBP25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 OR1E3Q8WZA6 343 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 ZNF778Q96MU6 729 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 SUDS3Q9H7L9 328 aaPredicted RBP25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 KLQ9UEF7 1012 aa25.2■■□□□ 1.62
TMEM55B-202ENST00000398020 MROH6A6NGR9 719 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 DFNA5O60443 496 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A9O60656 530 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 HOXC4P09017 264 aaPredicted RBP25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A6P19224 532 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A1P22309 533 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A4P22310 534 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 HOXD11P31277 338 aaPredicted RBP25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A3P35503 534 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A5P35504 534 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 PPARDQ03181 441 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 ZDHHC20Q5W0Z9 365 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A7Q9HAW7 530 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A10Q9HAW8 530 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 UGT1A8Q9HAW9 530 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 BFARQ9NZS9 450 aa25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 OAS3Q9Y6K5 1087 aaKnown RBP25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 ASCC3Q8N3C0 2202 aaKnown RBP25.19■■□□□ 1.62
TMEM55B-202ENST00000398020 ZNF106Q9H2Y7 1883 aaKnown RBP25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 HEATR9A2RTY3 570 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms