RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CD300AQ9UGN4 299 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 LIMD1Q9UGP4 676 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 B3GNT3Q9Y2A9 372 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MATN3O15232 486 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ERVK-10P10266 1014 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PTPN1P18031 435 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PSMB4P28070 264 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 DDR2Q16832 855 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 OTUD1Q5VV17 481 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 NECAB2Q7Z6G3 386 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TBC1D21Q8IYX1 336 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FAM156AQ8NDB6 213 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SETD9Q8NE22 299 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MAPK15Q8TD08 544 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 VPS33AQ96AX1 596 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CENPNQ96H22 339 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PLEKHA8Q96JA3 519 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TRIM54Q9BYV2 358 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 DUSP12Q9UNI6 340 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FADS3Q9Y5Q0 445 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 A0A0J9YVX5 310 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 A0A1W2PQ72 361 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 E7ENX8 843 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PDE9AO76083 593 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 XRCC1P18887 633 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ADORA2AP29274 412 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ALDH4A1P30038 563 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CBX2Q14781 532 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 QPRTQ15274 297 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZBED5Q49AG3 693 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 VARS2Q5ST30 1063 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MANEALQ5VSG8 457 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 C16orf62Q7Z3J2 963 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 HIPK1Q86Z02 1210 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TNS4Q8IZW8 715 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PAPD5Q8NDF8 572 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF540Q8NDQ6 660 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UTP15Q8TED0 518 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 C1orf74Q96LT6 269 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF599Q96NL3 588 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 IRF2BPLQ9H1B7 796 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF408Q9H9D4 720 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF224Q9NZL3 707 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ADAMTS6Q9UKP5 1117 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TCAF1Q9Y4C2 921 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PNMA8CA0A1B0GUJ8 204 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 KRT87PA6NCN2 255 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 IFRD1O00458 451 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 RECQL4O94761 1208 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 EGFRP00533 1210 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 PRLP01236 227 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 FYNP06241 537 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 SNRPB2P08579 225 aaKnown RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 LTA4HP09960 611 aaKnown RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 IL1RNP18510 177 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 STT3AP46977 705 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 ARCN1P48444 511 aaKnown RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 TTC23LQ6PF05 361 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 SAMD7Q7Z3H4 446 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 CARM1Q86X55 608 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 MMP19Q99542 508 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 NUAK2Q9H093 628 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 MOV10Q9HCE1 1003 aaKnown RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 FAM32AQ9Y421 112 aaKnown RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF646O15015 1829 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 H0YAE9 185 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 HAS3O00219 553 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 IRAK2O43187 625 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 MRPS14O60783 128 aaKnown RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 NFKB1P19838 968 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 BCAP31P51572 246 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 TOP3AQ13472 1001 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-205ENST00000397611 ZSWIM7Q19AV6 140 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 KLHL35Q6PF15 583 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 CMC1Q7Z7K0 106 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 FAM35AQ86V20 835 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 SPPL2CQ8IUH8 684 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 EID3Q8N140 333 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 CBR4Q8N4T8 237 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF781Q8N8C0 355 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 L3HYPDHQ96EM0 354 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 COQ10BQ9H8M1 238 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 UBP1Q9NZI7 540 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 M0QYT0 321 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 KCNK1O00180 336 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 LRIG2O94898 1065 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 PCNAP12004 261 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 GRK3P35626 688 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 GRIA1P42261 906 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 GRIA4P48058 902 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 LRP8Q14114 963 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 FOXB2Q5VYV0 432 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 MRNIPQ6NTE8 343 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 SPESP1Q6UW49 350 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 ZDHHC13Q8IUH4 622 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 CAMKK1Q8N5S9 505 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 DPP10Q8N608 796 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 GPR150Q8NGU9 434 aa5.43□□□□□ -1.54
PTPRD-205ENST00000397611 TFAP2CQ92754 450 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms