RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SLC35E2BP0CK96 405 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 COL6A1P12109 1028 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 KCNA5P22460 613 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PIK3R1P27986 724 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PNPLA4P41247 253 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SLC1A2P43004 574 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PSEN2P49810 448 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RPL14P50914 215 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TAS2R39P59534 338 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GRSF1Q12849 480 aaKnown RBP eCLIP5.02□□□□□ -1.61
SSR1-202ENST00000397511 CDH17Q12864 832 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 EIF2B5Q13144 721 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 ART3Q13508 389 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PAFAH1B3Q15102 231 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 MAPRE1Q15691 268 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 SLX4IPQ5VYV7 408 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ZC3HC1Q86WB0 502 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 CIR1Q86X95 450 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 MIB1Q86YT6 1006 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GALNT13Q8IUC8 556 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CENPLQ8N0S6 344 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 CLIP4Q8N3C7 705 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ATPAF2Q8N5M1 289 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ANGPTL6Q8NI99 470 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ACMSDQ8TDX5 336 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 OSCP1Q8WVF1 389 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RASSF5Q8WWW0 418 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RMDN1Q96DB5 314 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RPL10LQ96L21 214 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 TEKT5Q96M29 485 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CYP2S1Q96SQ9 504 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 COQ7Q99807 217 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TUBA1CQ9BQE3 449 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SLC39A8Q9C0K1 460 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 NAA50Q9GZZ1 169 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 RAD21L1Q9H4I0 556 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PIF1Q9H611 641 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 NANOGQ9H9S0 305 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TNFRSF12AQ9NP84 129 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MRGBPQ9NV56 204 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.02□□□□□ -1.61
SSR1-202ENST00000397511 RBM22Q9NW64 420 aaKnown RBP eCLIP5.02□□□□□ -1.61
SSR1-202ENST00000397511 OXSMQ9NWU1 459 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MKS1Q9NXB0 559 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ACOT9Q9Y305 439 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PTGDR2Q9Y5Y4 395 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 COL1A2P08123 1366 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 EYSQ5T1H1 3165 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 A0A0U1RQS6 177 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SMIM35A0A1B0GVV1 85 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 TMEM88BA6NKF7 163 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PPP6CO00743 305 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PAGE1O75459 146 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 STMN1P16949 149 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 TGM1P22735 817 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 YWHAQP27348 245 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 IDUAP35475 653 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 ARL1P40616 181 aaPredicted RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 OPRL1P41146 370 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NR4A2P43354 598 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 HARS2P49590 506 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 GPR15P49685 360 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 DDR2Q16832 855 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PIGGQ5H8A4 983 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 FAM117BQ6P1L5 589 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PLEKHG7Q6ZR37 379 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NEK10Q6ZWH5 1172 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PDZD4Q76G19 769 aaPredicted RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 PIM3Q86V86 326 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 COLGALT2Q8IYK4 626 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 OR52K2Q8NGK3 314 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 HEXDCQ8WVB3 486 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NT5C3BQ969T7 300 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NRBF2Q96F24 287 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SH3YL1Q96HL8 342 aaPredicted RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 TXNDC15Q96J42 360 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 EGLN2Q96KS0 407 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NAT9Q9BTE0 207 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 EFHD1Q9BUP0 239 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 POMKQ9H5K3 350 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NOL6Q9H6R4 1146 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 AGO3Q9H9G7 860 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 SPC25Q9HBM1 224 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 NEK6Q9HC98 313 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 FBRSL1Q9HCM7 1045 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 AASDHPPTQ9NRN7 309 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 FAM105AQ9NUU6 356 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 THG1LQ9NWX6 298 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 ABI2Q9NYB9 513 aaPredicted RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 SUCOQ9UBS9 1254 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 ZNF229Q9UJW7 825 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PSME2Q9UL46 239 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 KCTD3Q9Y597 815 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 ACTL7AQ9Y615 435 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 LOC285556D6RIA3 1793 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SBF1O95248 1867 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SPEGQ15772 3267 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 J3KR12 359 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 AP3B1O00203 1094 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms