RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 JRKO75564 520 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 PLA2G16P53816 162 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 TECRLQ5HYJ1 363 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 GPR158Q5T848 1215 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 GDAP2Q9NXN4 497 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 VPS51Q9UID3 782 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 CRYL1Q9Y2S2 319 aa23.94■■□□□ 1.42
CSNK1E-203ENST00000396832 LSM1O15116 133 aaKnown RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 SIX3O95343 332 aaPredicted RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 HLA-DQB2P05538 268 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 GPIP06744 558 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 S100A1P23297 94 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 APLP1P51693 650 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 C6orf183Q5T699 404 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 THOC7Q6I9Y2 204 aaKnown RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 PRMT9Q6P2P2 845 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 SCHIP1Q9P0W5 487 aaPredicted RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 WARS2Q9UGM6 360 aaKnown RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 BBIP1A8MTZ0 92 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 ALBP02768 609 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 NEPROQ6NW34 567 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 MINDY1Q8N5J2 469 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 CCDC97Q96F63 343 aaPredicted RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 ING2Q9H160 280 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 HMG20AQ9NP66 347 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 INTS10Q9NVR2 710 aaKnown RBP23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 MPP6Q9NZW5 540 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 NDUFAF1Q9Y375 327 aa23.93■■□□□ 1.42
CSNK1E-203ENST00000396832 ZFC3H1O60293 1989 aaKnown RBP23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 ASB14A6NK59 587 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 NCK1P16333 377 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 SLC6A2P23975 617 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 CASP2P42575 452 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 GSSP48637 474 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 AQP6Q13520 282 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 ARL10Q8N8L6 244 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 SGCDQ92629 289 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 ADNPQ9H2P0 1102 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 BTRCQ9Y297 605 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 ABCB7O75027 752 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 BCAS1O75363 584 aaPredicted RBP23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 ATP4BP51164 291 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 ITKQ08881 620 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 OTUD3Q5T2D3 398 aaPredicted RBP23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 LINC00523Q86TU6 105 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 OR6P1Q8NGX9 317 aa23.92■■□□□ 1.42
CSNK1E-203ENST00000396832 FXYD1O00168 92 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 ANGPT2O15123 496 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 SMPD1P17405 629 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 CAPN3P20807 821 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 SHMT2P34897 504 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 PCYT1AP49585 367 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 KPNA2P52292 529 aaKnown RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 FOXA1P55317 472 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 CRTC3Q6UUV7 619 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 EFHD2Q96C19 240 aaPredicted RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 RBM22Q9NW64 420 aaKnown RBP eCLIP23.91■■□□□ 1.422e-6■□□□□ 9.4
CSNK1E-203ENST00000396832 A0A087X1B8 175 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 H0Y858 1186 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 MTSS1O43312 755 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 LDLRP01130 860 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 IFITM3Q01628 133 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 DNASE1L3Q13609 305 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 PGS1Q32NB8 556 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 FUT11Q495W5 492 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 TTC16Q8NEE8 873 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 OR6J1Q8NGC5 347 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 NTAN1Q96AB6 310 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 TLR9Q9NR96 1032 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 IPPQ9Y573 584 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 PDCD11Q14690 1871 aaKnown RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 H0YAE9 185 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 RSL1D1O76021 490 aaKnown RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 MMP3P08254 477 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 RCVRNP35243 200 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 POLD2P49005 469 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 AGAP7PQ5VUJ5 663 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 TWF2Q6IBS0 349 aaKnown RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 HASPINQ8TF76 798 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 NSUN5Q96P11 429 aaKnown RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 HGH1Q9BTY7 390 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 FUNDC2Q9BWH2 189 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 AKTIPQ9H8T0 292 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 GLOD4Q9HC38 313 aa23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.91■■□□□ 1.42
CSNK1E-203ENST00000396832 OTOFQ9HC10 1997 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 DARSP14868 501 aaKnown RBP23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 GRB7Q14451 532 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 TMEM207Q6UWW9 146 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 C2CD4AQ8NCU7 369 aaPredicted RBP23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 PDZD8Q8NEN9 1154 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 LRRC58Q96CX6 371 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 SLC39A8Q9C0K1 460 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 TPK1Q9H3S4 243 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 AAR2Q9Y312 384 aaKnown RBP23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 ALOX5P09917 674 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 SCAPQ12770 1279 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 PTPRCAPQ14761 206 aa23.9■■□□□ 1.42
CSNK1E-203ENST00000396832 UGT3A2Q3SY77 523 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms