RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 NLRP8Q86W28 1048 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 RHOT1Q8IXI2 618 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 NRSN1Q8IZ57 195 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 NAGSQ8N159 534 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 TC2NQ8N9U0 490 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 EXD1Q8NHP7 514 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 EID2BQ96D98 161 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 LIN37Q96GY3 246 aaPredicted RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 COX14Q96I36 57 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 LYSMD1Q96S90 227 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 MLPHQ9BV36 600 aaPredicted RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 HAUS2Q9NVX0 235 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 RPL26L1Q9UNX3 145 aaKnown RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 PRKAB1Q9Y478 270 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 OAS3Q9Y6K5 1087 aaKnown RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 TRBV23OR9-2A0A075B6M9 112 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 FADS2P1A8MWK0 482 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 PLD2O14939 933 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 ASMTLO95671 621 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 PIRTP0C851 137 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 CA4P22748 312 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 MAGEA1P43355 309 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 ZFP36L1Q07352 338 aaKnown RBP18.19■□□□□ 0.5
FXN-203ENST00000396366 ADCY2Q08462 1091 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 PDK1Q15118 436 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 AMZ1Q400G9 498 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 PYCR3Q53H96 274 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 USP53Q70EK8 1073 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 FBXO39Q8N4B4 442 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 SPATA22Q8NHS9 363 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 KIAA1524Q8TCG1 905 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 IMP4Q96G21 291 aaKnown RBP18.19■□□□□ 0.5
FXN-203ENST00000396366 OR2M4Q96R27 311 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 TRIB3Q96RU7 358 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 TRIM5Q9C035 493 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 SEMA6CQ9H3T2 930 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 RDH14Q9HBH5 336 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 INTUQ9ULD6 942 aa18.19■□□□□ 0.5
FXN-203ENST00000396366 RHPN2P1A8MT19 583 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 PPM1DO15297 605 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 SPOPO43791 374 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 EML2O95834 649 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 ALDH4A1P30038 563 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 CCKBRP32239 447 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 ACTR1BP42025 376 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 CDKN2BP42772 138 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 SLC1A1P43005 524 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 SPINT3P49223 89 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 ACTR1AP61163 376 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 PCSK7Q16549 785 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 LYSMD3Q7Z3D4 306 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 GPR155Q7Z3F1 870 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 CLEC14AQ86T13 490 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 VSIG1Q86XK7 387 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 STRADBQ9C0K7 418 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 FAM83DQ9H4H8 585 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 ARFGAP3Q9NP61 516 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 DDX56Q9NY93 547 aaKnown RBP18.18■□□□□ 0.5
FXN-203ENST00000396366 ALG6Q9Y672 507 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 SCN8AQ9UQD0 1980 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 KALRNO60229 2985 aa18.18■□□□□ 0.5
FXN-203ENST00000396366 ATMQ13315 3056 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 ZFC3H1O60293 1989 aaKnown RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 TMX2-CTNND1H3BSU7 103 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 MT-CYBP00156 380 aaPredicted RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 PRB1P04280 392 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 ITGA2BP08514 1039 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 PECAM1P16284 738 aaPredicted RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 ZFXP17010 805 aaPredicted RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 ITIH1P19827 911 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 SLC5A2P31639 672 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 TAZQ16635 292 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 ZNF648Q5T619 568 aaPredicted RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 ARHGAP40Q5TG30 622 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 NKAIN2Q5VXU1 208 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 KAZNQ674X7 775 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 SARM1Q6SZW1 724 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 ZNF574Q6ZN55 896 aaPredicted RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 ZNF438Q7Z4V0 828 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 NT5DC3Q86UY8 548 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 SLITRK4Q8IW52 837 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 TADA1Q96BN2 335 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 TMEM74Q96NL1 305 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 UBL7Q96S82 380 aaPredicted RBP18.17■□□□□ 0.5
FXN-203ENST00000396366 ADGRE3Q9BY15 652 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 DPH1Q9BZG8 443 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 CDH19Q9H159 772 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 UBP1Q9NZI7 540 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 PISDQ9UG56 409 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 ZNHIT2Q9UHR6 403 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 DNPEPQ9ULA0 475 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 SHOC2Q9UQ13 582 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 LOXL2Q9Y4K0 774 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 BAHCC1Q9P281 2608 aa18.17■□□□□ 0.5
FXN-203ENST00000396366 FASNP49327 2511 aaKnown RBP18.16■□□□□ 0.5
FXN-203ENST00000396366 PPP1R12AO14974 1030 aaPredicted RBP18.16■□□□□ 0.5
FXN-203ENST00000396366 CST8O60676 142 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 DNAJC6O75061 913 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 CD1CP29017 333 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms