RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 HTRA2O43464 458 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 ICMTO60725 284 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 SOCS5O75159 536 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 SULT1C4O75897 302 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 KLHL2O95198 593 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 OXSR1O95747 527 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 OCM2P0CE71 109 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 OCMP0CE72 109 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 NAT2P11245 290 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TACR2P21452 398 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 S100A1P23297 94 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PSMD8P48556 350 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PGFP49763 221 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 POU4F1Q01851 419 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GUCA2AQ02747 115 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GAD2Q05329 585 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GRM3Q14832 879 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CYTH1Q15438 398 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PSMD5Q16401 504 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CDKN3Q16667 212 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PRSS36Q5K4E3 855 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 RARS2Q5T160 578 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 ADGRF1Q5T601 910 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 MBLAC2Q68D91 279 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CXorf57Q6NSI4 855 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 CCDC149Q6ZUS6 474 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GPR180Q86V85 440 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 NLRP8Q86W28 1048 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 HPS6Q86YV9 775 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 UNC5BQ8IZJ1 945 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TMEM199Q8N511 208 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CPSF7Q8N684 471 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 TSPAN14Q8NG11 270 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 SCAMP5Q8TAC9 235 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 STARD8Q92502 1023 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 USP13Q92995 863 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 E2F7Q96AV8 911 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 ECHDC3Q96DC8 303 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 MAELQ96JY0 434 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 HGH1Q9BTY7 390 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CPEB1Q9BZB8 566 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 DRC3Q9H069 523 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GPATCH2LQ9NWQ4 482 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS41-203ENST00000395969 VPS28Q9UK41 221 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 RNF11Q9Y3C5 154 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 SPO11Q9Y5K1 396 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 A0A1B0GTW7 788 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 A0A1B0GVM2 712 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 E2F8A0AVK6 867 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 RGSL1A5PLK6 1076 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 TCAF2A6NFQ2 919 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 A6NL46 340 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZNF195O14628 629 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 NPHS1O60500 1241 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 RNASEH2AO75792 299 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 STC2O76061 302 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 BMP10O95393 424 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ALDOAP04075 364 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 BPGMP07738 259 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 PSMB4P28070 264 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ATP5C1P36542 298 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 GRIK1P39086 918 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZNF140P52738 457 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 EPHB1P54762 984 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 SEC13P55735 322 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 CD300CQ08708 224 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 IFRD2Q12894 506 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 HECTD3Q5T447 861 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 C6orf52Q5T4I8 152 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 FAM171A1Q5VUB5 890 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 NANOGP8Q6NSW7 305 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 FBXL22Q6P050 247 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 PSRC1Q6PGN9 363 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZC3HC1Q86WB0 502 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 PALM2Q8IXS6 379 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 CENPSQ8N2Z9 138 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 DCAF4L2Q8NA75 395 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 RHEBL1Q8TAI7 183 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ADAMTS16Q8TE57 1224 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 FCRL3Q96P31 734 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 LGMNQ99538 433 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 DOK1Q99704 481 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 MECRQ9BV79 373 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 NLE1Q9NVX2 485 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 BFARQ9NZS9 450 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 MARCH2Q9P0N8 246 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 EVLQ9UI08 416 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 MOSPD1Q9UJG1 213 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 A8MU76 341 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 K7EPI3 171 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 PIP5K1CO60331 668 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 GRAP2O75791 330 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 PIAS1O75925 651 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ARHGEF15O94989 841 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 H6PDO95479 791 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 CD160O95971 181 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 HMOX2P30519 316 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 CLCN5P51795 746 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 CTBSQ01459 385 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms