RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 UNC5BQ8IZJ1 945 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 EXT2Q93063 718 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 HHATLQ9HCP6 504 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PHPT1Q9NRX4 125 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 COLEC10Q9Y6Z7 277 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TXNDC9O14530 226 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KDELR3O43731 214 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FAM155BO75949 473 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GJB6O95452 261 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 UROSP10746 265 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PRPS2P11908 318 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SERPINB1P30740 379 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HERVK_113P63132 956 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LAPTM5Q13571 262 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PLEKHG6Q3KR16 790 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TPRG1Q6ZUI0 275 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TRIM48Q8IWZ4 208 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF317Q96PQ6 595 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ERVK-6Q9BXR3 956 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ANLNQ9NQW6 1124 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KLHL28Q9NXS3 571 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AJAP1Q9UKB5 411 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DCXO43602 365 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PABPC1P11940 636 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF37AP17032 561 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 EIF2DP41214 584 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HEPACAMQ14CZ8 416 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 RANBP10Q6VN20 620 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZDHHC14Q8IZN3 488 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GOLM1Q8NBJ4 401 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 THOC1Q96FV9 657 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TMEM120AQ9BXJ8 343 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NUDT4Q9NZJ9 180 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GABRQQ9UN88 632 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF711Q9Y462 761 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CPQQ9Y646 472 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FAM208BQ5VWN6 2430 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SIP14410 1827 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SYNDIG1LA6NDD5 238 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NT5C1B-RDH14C9J2C7 533 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MT-CYBP00156 380 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 APODP05090 189 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FASP25445 335 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MTHFRP42898 656 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PRIM2P49643 509 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DNAJB13P59910 316 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TRIM40Q6P9F5 258 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CPXM2Q8N436 756 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PQLC3Q8N755 202 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TERB1Q8NA31 727 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LRRN4CLQ8ND94 238 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NLNQ9BYT8 704 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SFXN1Q9H9B4 322 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MID1IP1Q9NPA3 183 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KRCC1Q9NPI7 259 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 OXSMQ9NWU1 459 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TYROBPO43914 113 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DGKIO75912 1065 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 UBOX5O94941 541 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SHBGP04278 402 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ITGA2P17301 1181 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 IVDP26440 423 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 IRF8Q02556 426 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DSC3Q14574 896 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SPATA19Q7Z5L4 167 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 OR9Q1Q8NGQ5 310 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZFP28Q8NHY6 868 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FEM1AQ9BSK4 669 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PAK6Q9NQU5 681 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LEF1Q9UJU2 399 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AP1M2Q9Y6Q5 423 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TCRBV5S1A1TA0A578 114 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 H0YGN5 161 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FCHO1O14526 889 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MSI1O43347 362 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 RASSF9O75901 435 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PIGNO95427 931 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CD48P09326 243 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SLC35G4P0C7Q5 338 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HPCAL1P37235 193 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CLCN2P51788 898 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PHACTR4Q8IZ21 702 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HCAR2Q8TDS4 363 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SELENOMQ8WWX9 145 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MSANTD3Q96H12 275 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HAPLN2Q9GZV7 340 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC167Q9P0B6 97 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PDP2Q9P2J9 529 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MRPS33Q9Y291 106 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HEBP2Q9Y5Z4 205 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NFS1Q9Y697 457 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DOCK9Q9BZ29 2069 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 STX16-NPEPL1H3BU86 382 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 STX16O14662 325 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CLDN9O95484 217 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CXCL10P02778 98 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DNTTP04053 509 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 UMPSP11172 480 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PTX3P26022 381 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 BMPR1AP36894 532 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms