RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 DENND6AQ8IWF6 608 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 ZNF398Q8TD17 642 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 CRLS1Q9UJA2 301 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 FNDC3AQ9Y2H6 1198 aaKnown RBP13.63□□□□□ -0.23
VAPB-202ENST00000395802 FADS3Q9Y5Q0 445 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 COMMD10Q9Y6G5 202 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 A0A1W2PP55 124 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 TCRBV21S2A2A0A5A6 115 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 KRBA1A5PL33 1030 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 ANTXRLA6NF34 631 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 F8W8V4 182 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 CCL22O00626 93 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 SHOX2O60902 331 aaPredicted RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 C1SP09871 688 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 FOXN2P32314 431 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 PTGER3P43115 390 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 SERPINB8P50452 374 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 ADARP55265 1226 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 XIAPP98170 497 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 CREB5Q02930 508 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 PTPRRQ15256 657 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 AGBL4Q5VU57 503 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 KIAA1161Q6NSJ0 714 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 NEK5Q6P3R8 708 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 ZNF765Q7L2R6 523 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 CCDC91Q7Z6B0 441 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 TRABD2AQ86V40 505 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 NLRP8Q86W28 1048 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 ZC3HC1Q86WB0 502 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 AADATQ8N5Z0 425 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 TRAM1L1Q8N609 369 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 ACMSDQ8TDX5 336 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 HEXDCQ8WVB3 486 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 FAM131CQ96AQ9 280 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 TSPAN17Q96FV3 270 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 VPS39Q96JC1 886 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 MRGPRX1Q96LB2 322 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 PSAT1Q9Y617 370 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 TRIM49D1C9J1S8 452 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 FAM155BO75949 473 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 PCDH8O95206 1070 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 S1PR4O95977 384 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 ZNF7P17097 686 aaPredicted RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 COL9A1P20849 921 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 MAGEA9P43362 315 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 RPS21P63220 83 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 POU4F1Q01851 419 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 SMAD1Q15797 465 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 SETMARQ53H47 684 aaPredicted RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 HSD11B1LQ7Z5J1 315 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 SRRM1Q8IYB3 904 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 GPR26Q8NDV2 337 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 GPR22Q99680 433 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 SPATA16Q9BXB7 569 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 C1QTNF7Q9BXJ2 289 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 CNOT10Q9H9A5 744 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 TBC1D17Q9HA65 648 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 CD248Q9HCU0 757 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 PREBQ9HCU5 417 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
VAPB-202ENST00000395802 COL6A3P12111 3177 aa13.62□□□□□ -0.23
VAPB-202ENST00000395802 OR51F1A6NGY5 319 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 AGAP14A8MT82 685 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 FOXO6A8MYZ6 492 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 PLRG1O43660 514 aaKnown RBP13.61□□□□□ -0.23
VAPB-202ENST00000395802 UGT1A9O60656 530 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 TM7SF2O76062 418 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 RALBP11234 206 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 C6P13671 934 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 KRT4P19013 534 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 TYK2P29597 1187 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 ETV3P41162 512 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 RPS9P46781 194 aaKnown RBP13.61□□□□□ -0.23
VAPB-202ENST00000395802 CCT5P48643 541 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 METAP1P53582 386 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 MPP1Q00013 466 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 SEMG2Q02383 582 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 ITIH4Q14624 930 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 KIAA1324Q6UXG2 1013 aaKnown RBP13.61□□□□□ -0.23
VAPB-202ENST00000395802 TMEM92Q6UXU6 159 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 Q6ZVL8 140 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 TECPR1Q7Z6L1 1165 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 CACUL1Q86Y37 369 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 RBFAQ8N0V3 343 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 AP2M1Q96CW1 435 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 DTD2Q96FN9 168 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 MCMBPQ9BTE3 642 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 WRAP53Q9BUR4 548 aaKnown RBP13.61□□□□□ -0.23
VAPB-202ENST00000395802 CAPS2Q9BXY5 557 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 UGT1A7Q9HAW7 530 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 UGT1A10Q9HAW8 530 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 UGT1A8Q9HAW9 530 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 FBXO6Q9NRD1 293 aaPredicted RBP13.61□□□□□ -0.23
VAPB-202ENST00000395802 SMOXQ9NWM0 555 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 PCDHB1Q9Y5F3 818 aa13.61□□□□□ -0.23
VAPB-202ENST00000395802 A0A0U1RQS6 177 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 CFAP99D6REC4 459 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 H3BMM5 538 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms