RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C1orf61Q13536 156 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 PUM1Q14671 1186 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNCA-203ENST00000394986 TAF1AQ15573 450 aaPredicted RBP19.8■□□□□ 0.76
SNCA-203ENST00000394986 PPP1R21Q6ZMI0 780 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 DBX2Q6ZNG2 339 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 MICALCLQ6ZW33 695 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 NLRP8Q86W28 1048 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 SLC25A45Q8N413 288 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 ZNF548Q8NEK5 533 aaPredicted RBP19.8■□□□□ 0.76
SNCA-203ENST00000394986 LRRC61Q9BV99 259 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 ARFGAP3Q9NP61 516 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNCA-203ENST00000394986 CNOT6Q9ULM6 557 aaKnown RBP19.8■□□□□ 0.76
SNCA-203ENST00000394986 TMEM98Q9Y2Y6 226 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 NEU2Q9Y3R4 380 aa19.8■□□□□ 0.76
SNCA-203ENST00000394986 TCRBV7S3A2A0A539 114 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 ERI2A8K979 691 aaKnown RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 STX7O15400 261 aaKnown RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 FFAR2O15552 330 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 FLRT2O43155 660 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 GPR39O43194 453 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 SUN1O94901 812 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 CELA2BP08218 269 aaPredicted RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 HNRNPKP61978 463 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNCA-203ENST00000394986 SEPT6Q14141 434 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 POU6F1Q14863 301 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 SUZ12Q15022 739 aaKnown RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 HS1BP3Q53T59 392 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 PRRT3Q5FWE3 981 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 FAM151BQ6UXP7 276 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 C4orf22Q6V702 233 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 EID2Q8N6I1 236 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 DNAAF3Q8N9W5 541 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 OR4K2Q8NGD2 314 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 OR13C4Q8NGS5 318 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 BRSK1Q8TDC3 778 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 LMX1AQ8TE12 382 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 RHBDD1Q8TEB9 315 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 HIC2Q96JB3 615 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 FRMD8Q9BZ67 464 aaPredicted RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 IL26Q9NPH9 171 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 NFKBIL1Q9UBC1 381 aaPredicted RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 FEZ2Q9UHY8 353 aaPredicted RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 PCOLCE2Q9UKZ9 415 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 PKP3Q9Y446 797 aa19.79■□□□□ 0.76
SNCA-203ENST00000394986 OAS3Q9Y6K5 1087 aaKnown RBP19.79■□□□□ 0.76
SNCA-203ENST00000394986 H3BM21 787 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 CCL22O00626 93 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 CBFA2T3O75081 653 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 FUCA1P04066 466 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 CEACAM5P06731 702 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 LPOP22079 712 aaPredicted RBP19.78■□□□□ 0.76
SNCA-203ENST00000394986 KELP23276 732 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 GRK6P43250 576 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 HK3P52790 923 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 TMPRSS15P98073 1019 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 CDH17Q12864 832 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 CERCAMQ5T4B2 595 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 ZNF648Q5T619 568 aaPredicted RBP19.78■□□□□ 0.76
SNCA-203ENST00000394986 PSAPL1Q6NUJ1 521 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 MARK2Q7KZI7 788 aaKnown RBP19.78■□□□□ 0.76
SNCA-203ENST00000394986 LINC00523Q86TU6 105 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 KLHL7Q8IXQ5 586 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 TRAM1L1Q8N609 369 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 COX14Q96I36 57 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 PLEKHG4BQ96PX9 1271 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 ZSCAN5AQ9BUG6 496 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 SLC13A1Q9BZW2 595 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 CYP4F12Q9HCS2 524 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 RAD18Q9NS91 495 aa19.78■□□□□ 0.76
SNCA-203ENST00000394986 DCHS1Q96JQ0 3298 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 PRSS38A1L453 326 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 CCDC78A2IDD5 438 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 C2orf81A6NN90 581 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 GAPDHSO14556 408 aaPredicted RBP19.77■□□□□ 0.76
SNCA-203ENST00000394986 LDB2O43679 373 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 RASGRP1O95267 797 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 ECEL1O95672 775 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 PYGLP06737 847 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 CSRP1P21291 193 aaKnown RBP19.77■□□□□ 0.76
SNCA-203ENST00000394986 CA5AP35218 305 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 SPAM1P38567 509 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 PAFAH1B1P43034 410 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 NOVA1P51513 510 aaKnown RBP19.77■□□□□ 0.76
SNCA-203ENST00000394986 ZNF140P52738 457 aaPredicted RBP19.77■□□□□ 0.76
SNCA-203ENST00000394986 CCDC38Q502W7 563 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 GRK7Q8WTQ7 553 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 CLPBQ9H078 707 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 CDH19Q9H159 772 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 CASS4Q9NQ75 786 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 EIF2B3Q9NR50 452 aaKnown RBP19.77■□□□□ 0.76
SNCA-203ENST00000394986 FKBPLQ9UIM3 349 aa19.77■□□□□ 0.76
SNCA-203ENST00000394986 GLYATL1P3A0A0U1RQE8 302 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 TRIM38O00635 465 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 AQP9O43315 295 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 KCNK5O95279 499 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 ASMTLO95671 621 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 CRTAMO95727 393 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 GIMD1P0DJR0 217 aa19.76■□□□□ 0.75
SNCA-203ENST00000394986 CHRNA6Q15825 494 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms