RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CMPK1P30085 196 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PPIDQ08752 370 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 BST1Q10588 318 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF155Q12901 538 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 AUHQ13825 339 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ARSHQ5FYA8 562 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CFAP206Q8IYR0 622 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 EIF1ADQ8N9N8 165 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF540Q8NDQ6 660 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CSPG4P5Q96PW8 444 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PCDHGB3Q9Y5G1 929 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 LRRC72A6NJI9 287 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 SUV39H1O43463 412 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CILPO75339 1184 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CCNE2O96020 404 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 RHOQP17081 205 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 EPHA3P29320 983 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CDH4P55283 916 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CAP1Q01518 475 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 TTC23Q5W5X9 447 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 HIPK1Q86Z02 1210 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 RP9Q8TA86 221 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ADAMTS15Q8TE58 950 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 HERVK_113Q902F9 699 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 RHOBTB2Q9BYZ6 727 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CDH19Q9H159 772 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ERGIC3Q9Y282 383 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 A0A1W2PQ67 120 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 LRRC10BA6NIK2 292 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PER2O15055 1255 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 SLC22A3O75751 556 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CDH3P22223 829 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PPIBP23284 216 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 MYL9P24844 172 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 MBTD1Q05BQ5 628 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 GRSF1Q12849 480 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PTPN20Q4JDL3 420 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 OR10H5Q8NGA6 315 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 NMUR1Q9HB89 426 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 HMG20AQ9NP66 347 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 C3orf18Q9UK00 162 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 MRPS7Q9Y2R9 242 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 HDAC3O15379 428 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 MFSD11O43934 449 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PEX10O60683 326 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 FSBPO95073 299 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 LBX2Q6XYB7 198 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 SAPCD2Q86UD0 394 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CPXM1Q96SM3 734 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 SYT17Q9BSW7 474 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 POLE3Q9NRF9 147 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 DNAJC11Q9NVH1 559 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 TCRBV9S1A1TA0A576 114 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 IFNGP01579 166 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 OMPP47874 163 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 SP2Q02086 613 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 CIR1Q86X95 450 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 TTC29Q8NA56 475 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 VANGL1Q8TAA9 524 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 C5orf34Q96MH7 638 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 NECTIN3Q9NQS3 549 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 CRNNQ9UBG3 495 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 MFHAS1Q9Y4C4 1052 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 PRMT5O14744 637 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 MFN2O95140 757 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 GIMD1P0DJR0 217 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ACRP10323 421 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 CDH13P55290 713 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 BROXQ5VW32 411 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 RNF43Q68DV7 783 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 GALNT18Q6P9A2 607 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 DPEP2Q9H4A9 486 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 CIDEBQ9UHD4 219 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 A0A0U1RQJ8 604 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 C5orf60A6NFR6 353 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 PSMD11O00231 422 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 LYPLA1O75608 230 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 C22orf31O95567 290 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 C4BPAP04003 597 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 PKMP14618 531 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 MASP1P48740 699 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ATP13A5Q4VNC0 1218 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 RNASEH2BQ5TBB1 312 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 CMC1Q7Z7K0 106 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 FBXW8Q8N3Y1 598 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 STYXQ8WUJ0 223 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 TEFMQ96QE5 360 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 MECRQ9BV79 373 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 PSMD13Q9UNM6 376 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 UGT2B17O75795 530 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 S100GP29377 79 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 PRKCZQ05513 592 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ABRAXAS1Q6UWZ7 409 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 C12orf56Q8IXR9 622 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ATP6V1C2Q8NEY4 427 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms