RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 R3HCC1LQ7Z5L2 792 aaKnown RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 PSTKQ8IV42 348 aaKnown RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 OR13J1Q8NGT2 312 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 GRPEL2Q8TAA5 225 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 SPPL2BQ8TCT7 592 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 MAGEE2Q8TD90 523 aaPredicted RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 BTBD2Q9BX70 525 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 MEAF6Q9HAF1 191 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 CITO14578 2027 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 A0A0A0MRY4 1105 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 M0R3G1 203 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 B4GAT1O43505 415 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 NADKO95544 446 aaPredicted RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 MMP3P08254 477 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 MGAT1P26572 445 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 IFNA8P32881 189 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 RSBN1Q5VWQ0 802 aaPredicted RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 NCBP2-AS2Q69YL0 99 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 ALKAL1Q6UXT8 129 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 SVOPQ8N4V2 548 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 DYNC2LI1Q8TCX1 351 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 RMDN1Q96DB5 314 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 SPATA13Q96N96 652 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 RDH12Q96NR8 316 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 MCMBPQ9BTE3 642 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 C12orf10Q9HB07 376 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 POLE4Q9NR33 117 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 PAK1IP1Q9NWT1 392 aaPredicted RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 PCDHGB1Q9Y5G3 927 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 UBDO15205 165 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 SNAI1O95863 264 aaPredicted RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 CCR10P46092 362 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 SUZ12Q15022 739 aaKnown RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 NFE2Q16621 373 aaPredicted RBP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 DUSP28Q4G0W2 176 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 SPPL2CQ8IUH8 684 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 CCDC185Q8N715 623 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 OSCP1Q8WVF1 389 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.6
HOXC6-202ENST00000394331 ELMO2Q96JJ3 720 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 ZNF560Q96MR9 790 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 LPIN3Q9BQK8 851 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 C1QTNF1Q9BXJ1 281 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 SETD4Q9NVD3 440 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 ZNF221Q9UK13 617 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 PMF1-BGLAPU3KQ54 211 aa18.81■□□□□ 0.6
HOXC6-202ENST00000394331 TARM1B6A8C7 271 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 ERVK-10P10266 1014 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 PNPLA4P41247 253 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 GJA9P57773 515 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 STRA8Q7Z7C7 330 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 ADCK1Q86TW2 530 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 MINDY1Q8N5J2 469 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 FAM49AQ9H0Q0 323 aaPredicted RBP18.8■□□□□ 0.6
HOXC6-202ENST00000394331 SPC25Q9HBM1 224 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 HES2Q9Y543 173 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 E2F8A0AVK6 867 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 PIRO00625 290 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 NME4O00746 187 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 RECQL4O94761 1208 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 HTR1AP08908 422 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 SHMT2P34897 504 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 MATKP42679 507 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 HSPA14Q0VDF9 509 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 TAF2Q6P1X5 1199 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 FKBP9P1Q75LS8 142 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 SLA2Q9H6Q3 261 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 NDUFS2O75306 463 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 CCNKO75909 580 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 PCMT1P22061 227 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 GP2P55259 537 aaKnown RBP18.8■□□□□ 0.6
HOXC6-202ENST00000394331 SLC22A17Q8WUG5 538 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 DACH2Q96NX9 599 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 CCDC167Q9P0B6 97 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 USP3Q9Y6I4 520 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 MAU2Q9Y6X3 613 aa18.8■□□□□ 0.6
HOXC6-202ENST00000394331 TK2O00142 265 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 TOR1BO14657 336 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 LDLRP01130 860 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 GOT1P17174 413 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 SMPD1P17405 629 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 OXTRP30559 389 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 GJA5P36382 358 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 CRADDP78560 199 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 MAPK11Q15759 364 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 UBE2UQ5VVX9 321 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 AGAP6Q5VW22 663 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 PIGZQ86VD9 579 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 AFAP1L2Q8N4X5 818 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 MFSD3Q96ES6 412 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 TSNARE1Q96NA8 513 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 AGAP4Q96P64 663 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 DSN1Q9H410 356 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 RABL2BQ9UNT1 228 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 RAD51BO15315 384 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 GPR32O75388 356 aa18.79■□□□□ 0.6
HOXC6-202ENST00000394331 PKLRP30613 574 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms