RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 BCAS2O75934 225 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 TMCC1O94876 653 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ABLIM3O94929 683 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MLYCDO95822 493 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 URODP06132 367 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PIRTP0C851 137 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 IRF1P10914 325 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MBL2P11226 248 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PKMP14618 531 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 RPL17P18621 184 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MC4RP32245 332 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 HSPA13P48723 471 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CLCN4P51793 760 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 EPHB3P54753 998 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ADARP55265 1226 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 C1QTNF8P60827 252 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PSME3P61289 254 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 AP1S1P61966 158 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MED21Q13503 144 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CDH18Q13634 790 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 IKBKEQ14164 716 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SEMA3AQ14563 771 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CYTH1Q15438 398 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 KIF19Q2TAC6 998 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 GRAMD1BQ3KR37 738 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PABPC1LQ4VXU2 614 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 AGKQ53H12 422 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 KANK2Q63ZY3 851 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ANKS6Q68DC2 871 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 REP15Q6BDI9 236 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CXorf57Q6NSI4 855 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PRMT9Q6P2P2 845 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CNKSR3Q6P9H4 555 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 GK5Q6ZS86 529 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 LARP4Q71RC2 724 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 KBTBD2Q8IY47 623 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 KCNJ9Q92806 393 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SCLYQ96I15 445 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 EXOC2Q96KP1 924 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ZNF558Q96NG5 402 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CYP2S1Q96SQ9 504 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CCT7Q99832 543 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 C19orf43Q9BQ61 176 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 C1QTNF3Q9BXJ4 246 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MID1IP1Q9NPA3 183 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 POLR3BQ9NW08 1133 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ADA2Q9NZK5 511 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 LSM7Q9UK45 103 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SARDHQ9UL12 918 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PKP3Q9Y446 797 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 DTNAQ9Y4J8 743 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PCDHB1Q9Y5F3 818 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SPO11Q9Y5K1 396 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 OAS3Q9Y6K5 1087 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 HELZP42694 1942 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 COL4A6Q14031 1691 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 H3BNX3 289 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MRASO14807 208 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ADAM12O43184 909 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 NRP2O60462 931 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SNX2O60749 519 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 TBL1XO60907 577 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CLASP2O75122 1294 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 GJB3O75712 270 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ESR1P03372 595 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 KLKB1P03952 638 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 RPS17P08708 135 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 HSPA8P11142 646 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 UQCRBP14927 111 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 LBPP18428 481 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 LAG3P18627 525 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 XRCC1P18887 633 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PEX2P28328 305 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 FMO4P31512 558 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 RFC2P35250 354 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PTGER3P43115 390 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 RGRP47804 291 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ERFP50548 548 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CLCN2P51788 898 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 RHOAP61586 193 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SMAD3P84022 425 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ARF5P84085 180 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CLCQ05315 142 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 TWF1Q12792 350 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 TRAP1Q12931 704 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CEACAM7Q14002 265 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ADGRE1Q14246 886 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 OR4D1Q15615 310 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PTPRNQ16849 979 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 PFKFB4Q16877 469 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ZRANB3Q5FWF4 1079 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 COQ5Q5HYK3 327 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SAMD4BQ5PRF9 694 aaKnown RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 OGFRL1Q5TC84 451 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 RETSATQ6NUM9 610 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 NCEH1Q6PIU2 408 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CERS6Q6ZMG9 384 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 C16orf59Q7L2K0 433 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MIER2Q8N344 545 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms