RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RCBTB1Q8NDN9 531 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 PATE1Q8WXA2 126 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 NKD1Q969G9 470 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 NAP1L5Q96NT1 182 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 ADNPQ9H2P0 1102 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 NT5MQ9NPB1 228 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 WDR70Q9NW82 654 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 GEMIN8Q9NWZ8 242 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 GOLGA6AQ9NYA3 693 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 KCNK4Q9NYG8 393 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 SPTA1P02549 2419 aa17.39■□□□□ 0.37
SNRPA1-202ENST00000394082 SDK2Q58EX2 2172 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 MYO1FO00160 1098 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 CTPS1P17812 591 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 WT1P19544 449 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 CCNCP24863 283 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 CSF2RBP32927 897 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 ZNF165P49910 485 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 ARSEP51690 589 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 HADHQ16836 314 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 CCDC122Q5T0U0 273 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 WDR74Q6RFH5 385 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 GALNT13Q8IUC8 556 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 TEFMQ96QE5 360 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 SLC12A9Q9BXP2 914 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 TDRD1Q9BXT4 1180 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 THAP2Q9H0W7 228 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 SUDS3Q9H7L9 328 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 RMI1Q9H9A7 625 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 TMEM63CQ9P1W3 806 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 ANAPC7Q9UJX3 599 aa17.38■□□□□ 0.37
SNRPA1-202ENST00000394082 RGSL1A5PLK6 1076 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 TERTO14746 1132 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 CAPN5O15484 640 aaPredicted RBP17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 SUV39H1O43463 412 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 UGT1A3P35503 534 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 EPHB1P54762 984 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 KRT81Q14533 505 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 PTPRRQ15256 657 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 IFI16Q16666 785 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 ATG14Q6ZNE5 492 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 RFLNAQ6ZTI6 216 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 PRICKLE2Q7Z3G6 844 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 OR10G6Q8NH81 332 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 HTR3CQ8WXA8 447 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 SCAMP4Q969E2 229 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 COL26A1Q96A83 441 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 SH3KBP1Q96B97 665 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 ZNF670Q9BS34 389 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 FUCA2Q9BTY2 467 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 SARS2Q9NP81 518 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 IL17BQ9UHF5 180 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 TUBD1Q9UJT1 453 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 TMEM98Q9Y2Y6 226 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 B3GALT1Q9Y5Z6 326 aa17.37■□□□□ 0.37
SNRPA1-202ENST00000394082 DUX1O43812 170 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 MFSD11O43934 449 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 DNAJC6O75061 913 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 PPFIA2O75334 1257 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 PRLP01236 227 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 SERPING1P05155 500 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 FAM87AP0C7U9 286 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 ITKQ08881 620 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 DPYSL3Q14195 570 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 IHHQ14623 411 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 PDK2Q15119 407 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 TDRD12Q587J7 1177 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 DCAF12Q5T6F0 453 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 NKAIN2Q5VXU1 208 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 NCBP2-AS2Q69YL0 99 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 DOK6Q6PKX4 331 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 BMPERQ8N8U9 685 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 AVL9Q8NBF6 648 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 ARRDC2Q8TBH0 407 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 SLC37A2Q8TED4 501 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 ART4Q93070 314 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 CATSPER2Q96P56 530 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 SLC38A3Q99624 504 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 ZPBPQ9BS86 351 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 NUP85Q9BW27 656 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 SPRY4Q9C004 299 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 SLC25A18Q9H1K4 315 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 EPB41L1Q9H4G0 881 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 CD84Q9UIB8 345 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 LCMT1Q9UIC8 334 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 PLEKHM1Q9Y4G2 1056 aa17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 ZFC3H1O60293 1989 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-202ENST00000394082 SERPINC1P01008 464 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 CD48P09326 243 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 SLC2A4P14672 509 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 MX2P20592 715 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 MAN1A1P33908 653 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 PBX1P40424 430 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 EPHA4P54764 986 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 IQCB1Q15051 598 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 HENMT1Q5T8I9 393 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 BORAQ6PGQ7 559 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 ARHGAP22Q7Z5H3 698 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms