RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ARHGEF7Q14155 803 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 NR1D2Q14995 579 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 HS6ST3Q8IZP7 471 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CLEC4FQ8N1N0 589 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 SPPL2BQ8TCT7 592 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 STYXQ8WUJ0 223 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 C19orf60Q96EN9 201 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 NRBF2Q96F24 287 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 COX4I2Q96KJ9 171 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 C17orf80Q9BSJ5 609 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 TTPALQ9BTX7 342 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 GPBP1L1Q9HC44 474 aaPredicted RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 MYOCOSA0A1B0GUC4 107 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 G3V2L1 256 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 HAS3O00219 553 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 ZNF23P17027 643 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 SERPINB1P30740 379 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 NDST2P52849 883 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 SMAD3P84022 425 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 GNA12Q03113 381 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 OTUD3Q5T2D3 398 aaPredicted RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 PIK3R6Q5UE93 754 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 OTUD1Q5VV17 481 aaPredicted RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 PGAM4Q8N0Y7 254 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 DCUN1D1Q96GG9 259 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CORO1BQ9BR76 489 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CCDC90BQ9GZT6 254 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 FBRSL1Q9HCM7 1045 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 ZC4H2Q9NQZ6 224 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 AP4B1Q9Y6B7 739 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 ZNFX1Q9P2E3 1918 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 NPEPPSL1A6NEC2 478 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 OR6C75A6NL08 312 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CAPN14A8MX76 684 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 TAF4O00268 1085 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CA12O43570 354 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 RPP40O75818 363 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 WEE1P30291 646 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CORO1AP31146 461 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 NR1H2P55055 460 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 TRAF2Q12933 501 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 DDX39BQ13838 428 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 TSNQ15631 228 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 TRIP4Q15650 581 aaPredicted RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 PPP1R3AQ16821 1122 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CYP51A1Q16850 503 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 PARP15Q460N3 678 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 AARS2Q5JTZ9 985 aaKnown RBP10.51□□□□□ -0.73
CALD1-203ENST00000393118 ZNF276Q8N554 614 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 TSPAN14Q8NG11 270 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 NRG4Q8WWG1 115 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 LPGAT1Q92604 370 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 IGSF8Q969P0 613 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 CCDC28BQ9BUN5 200 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 A0A0D9SEW6 157 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 A0A0J9YYE9 177 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 FFAR3O14843 346 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 GPR42O15529 346 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 TBL1XO60907 577 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 CLASP2O75122 1294 aaKnown RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 NDST3O95803 873 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 C1RP00736 705 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ARSDP51689 593 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ACAP2Q15057 778 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ATP6AP1LQ52LC2 224 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 PM20D1Q6GTS8 502 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 IL27RAQ6UWB1 636 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ANKS3Q6ZW76 656 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SCD5Q86SK9 330 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 LINGO1Q96FE5 620 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SH3GL1Q99961 368 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 C11orf84Q9BUA3 381 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 MOSPD1Q9UJG1 213 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 UNCXA6NJT0 531 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SLC7A4O43246 635 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 TIPRLO75663 272 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SLC2A4P14672 509 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 LPOP22079 712 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 PIK3CGP48736 1102 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 CCNG1P51959 295 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SEMG2Q02383 582 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 RGS21Q2M5E4 152 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 C6orf52Q5T4I8 152 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 C17orf99Q6UX52 265 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SH2D5Q6ZV89 423 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 CD99L2Q8TCZ2 262 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SCLYQ96I15 445 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ZFYVE19Q96K21 471 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 CIB1Q99828 191 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 GPATCH1Q9BRR8 931 aaKnown RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.5□□□□□ -0.73
CALD1-203ENST00000393118 C1orf21Q9H246 121 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 TLE6Q9H808 572 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 CFAP99D6REC4 459 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 H3BSA7 217 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 HOXA2O43364 376 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 DNAJA2O60884 412 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ZNF623O75123 536 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 MT-ND1P03886 318 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms