RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PPP2R2BQ00005 443 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 OXA1LQ15070 435 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 ZNF697Q5TEC3 545 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TTC7BQ86TV6 843 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TRABD2AQ86V40 505 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 THAP11Q96EK4 314 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TDRD1Q9BXT4 1180 aaKnown RBP18.97■□□□□ 0.63
CCDC50-202ENST00000392456 SMG9Q9H0W8 520 aaKnown RBP18.97■□□□□ 0.63
CCDC50-202ENST00000392456 PLAC1Q9HBJ0 212 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 C12orf4Q9NQ89 552 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 MTO1Q9Y2Z2 717 aaKnown RBP18.97■□□□□ 0.63
CCDC50-202ENST00000392456 CPQQ9Y646 472 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 AP4B1Q9Y6B7 739 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 KPNA4O00629 521 aaPredicted RBP18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TSPAN9O75954 239 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 KLHL2O95198 593 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 NFKB1P19838 968 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 NR4A1P22736 598 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 CCNCP24863 283 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 ACVRL1P37023 503 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 LSM12Q3MHD2 195 aaKnown RBP18.97■□□□□ 0.63
CCDC50-202ENST00000392456 CCDC149Q6ZUS6 474 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 SPARTQ8N0X7 666 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 CAPSLQ8WWF8 208 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TCEAL4Q96EI5 215 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TEKT5Q96M29 485 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 DCUN1D5Q9BTE7 237 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 ATXN3LQ9H3M9 355 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 VPS37BQ9H9H4 285 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 EBF1Q9UH73 591 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 IPO11Q9UI26 975 aaKnown RBP18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TEX264Q9Y6I9 313 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 A0A0D9SEW6 157 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 WDR91A4D1P6 747 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 F5H5T6 163 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 FCHO1O14526 889 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 PEX11BO96011 259 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 MYL4P12829 197 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 OR1E1P30953 314 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 PPP3CCP48454 512 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 CRADDP78560 199 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 SLC1A5Q15758 541 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 MOGQ16653 247 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 ATP2A3Q93084 1043 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 CIB1Q99828 191 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 FERMT1Q9BQL6 677 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 MLPHQ9BV36 600 aaPredicted RBP18.96■□□□□ 0.63
CCDC50-202ENST00000392456 GBF1Q92538 1859 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 A0A1B0GTW7 788 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 SYCE1LA8MT33 242 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 H3BNC9 293 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 J3QRK9 145 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 PSMD12O00232 456 aaPredicted RBP18.96■□□□□ 0.63
CCDC50-202ENST00000392456 SLC11A2P49281 568 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 B2MP61769 119 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 OVGP1Q12889 678 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 NR1H3Q13133 447 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 TUBA3EQ6PEY2 450 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 XKR5Q6UX68 686 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 TRIML2Q8N7C3 387 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 TSPAN14Q8NG11 270 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 SPATA22Q8NHS9 363 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 ADAMTS16Q8TE57 1224 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 TRUB1Q8WWH5 349 aaKnown RBP18.96■□□□□ 0.63
CCDC50-202ENST00000392456 PLD4Q96BZ4 506 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 FBXL8Q96CD0 374 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 ISOC1Q96CN7 298 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 KCNK13Q9HB14 408 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 ANKMY1Q9P2S6 941 aa18.96■□□□□ 0.63
CCDC50-202ENST00000392456 ZNF701M0R085 212 aaPredicted RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 MATN3O15232 486 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 SCO2O43819 266 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 OLFM2O95897 454 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 TPSB2P20231 275 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 M6PRP20645 277 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 MAGEA3P43357 314 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 BMXP51813 675 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 CCNIQ14094 377 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 TPSAB1Q15661 275 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 PPM1LQ5SGD2 360 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 COL13A1Q5TAT6 717 aaPredicted RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 AGAP7PQ5VUJ5 663 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 GALNT13Q8IUC8 556 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 CPNE9Q8IYJ1 553 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 MCUQ8NE86 351 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 SHKBP1Q8TBC3 707 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 SLC26A7Q8TE54 656 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 MRRFQ96E11 262 aaKnown RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 OXNAD1Q96HP4 312 aaPredicted RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 AIFM2Q9BRQ8 373 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 TP63Q9H3D4 680 aaPredicted RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 VPS45Q9NRW7 570 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 ANGPTL3Q9Y5C1 460 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 ACTL7AQ9Y615 435 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 OBSL1O75147 1896 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 ARHGAP42A6NI28 874 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 CFAP99D6REC4 459 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 ALX3O95076 343 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 GCAP28676 217 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 ADGRD2Q7Z7M1 963 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms