RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CARTPTQ16568 116 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SPATA19Q7Z5L4 167 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 C12orf56Q8IXR9 622 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 C7orf50Q9BRJ6 194 aaKnown RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 OGDHLQ9ULD0 1010 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 CDK10Q15131 360 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 FNDC3BQ53EP0 1204 aaKnown RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 CEP76Q8TAP6 659 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SNX33Q8WV41 574 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 TIFAQ96CG3 184 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 DIRAS2Q96HU8 199 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 PGLYRP2Q96PD5 576 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 MFSD1Q9H3U5 465 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 ZDHHC4Q9NPG8 344 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 HPF1Q9NWY4 346 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 ZMYM5Q9UJ78 669 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 IFT52Q9Y366 437 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SRSF11Q05519 484 aaKnown RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 PRAMEF17Q5VTA0 474 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 DNM1P34Q6PK57 102 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 NUP54Q7Z3B4 507 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 OR4C6Q8NH72 309 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 THAP6Q8TBB0 222 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 VPS45Q9NRW7 570 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 PROCP04070 461 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
CCDC50-201ENST00000392455 S100A7P31151 101 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 DIP2AQ14689 1571 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 LRMDAQ9H2I8 198 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 C2CD2Q9Y426 696 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 TELO2Q9Y4R8 837 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 WASF2Q9Y6W5 498 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 SPATA31A6Q5VVP1 1343 aa14.7□□□□□ -0.06
CCDC50-201ENST00000392455 MAPK3P27361 379 aaPredicted RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 GRIK4Q16099 956 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 MTFMTQ96DP5 389 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 OSGEPQ9NPF4 335 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 MRPL42Q9Y6G3 142 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 WDR27A2RRH5 827 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 RGL2O15211 777 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 IFNA10P01566 189 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CPNE9Q8IYJ1 553 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 WDSUB1Q8N9V3 476 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 AP2M1Q96CW1 435 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CD163L1Q9NR16 1453 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 TNFRSF10BO14763 440 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PCDHGA12O60330 932 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 ASGR1P07306 291 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 SEC14L3Q9UDX4 400 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 C14orf166Q9Y224 244 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PCDHB5Q9Y5E4 795 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CNTNAP4Q9C0A0 1308 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CAPN14A8MX76 684 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PROSCO94903 275 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 STXBP5Q5T5C0 1151 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 GCNT7Q6ZNI0 430 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 GPRIN3Q6ZVF9 776 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 TMEM86AQ8N2M4 240 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 METTL21AQ8WXB1 218 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 KCTD5Q9NXV2 234 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 POLLQ9UGP5 575 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 AP5Z1O43299 807 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 WFS1O76024 890 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 AKT2P31751 481 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PTPN11Q06124 597 aaPredicted RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 LAPTM5Q13571 262 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 COLEC12Q5KU26 742 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 C9orf131Q5VYM1 1079 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 OVOS1Q6IE37 1185 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CYP4X1Q8N118 509 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 ZCCHC9Q8N567 271 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CHST4Q8NCG5 386 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 OR14K1Q8NGZ2 314 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 CREB3L1Q96BA8 519 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 COLEC10Q9Y6Z7 277 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 RFXANKO14593 260 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 IFNA4P05014 189 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 SLC6A4P31645 630 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 DRG2P55039 364 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 LIPEQ05469 1076 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 SEC23AQ15436 765 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 ZNF311Q5JNZ3 666 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 FAM171A1Q5VUB5 890 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 DOK6Q6PKX4 331 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 FUT8Q9BYC5 575 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 RSPH9Q9H1X1 276 aaPredicted RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PIH1D1Q9NWS0 290 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 THUMPD1Q9NXG2 353 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 TULP3O75386 442 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 GMCL1P1Q8NEA9 526 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 NECAB3Q96P71 396 aaPredicted RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PANX1Q96RD7 426 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 NXF3Q9H4D5 531 aaKnown RBP14.69□□□□□ -0.06
CCDC50-201ENST00000392455 IGFLR1Q9H665 355 aa14.69□□□□□ -0.06
CCDC50-201ENST00000392455 PRAMEF33A0A0G2JMD5 474 aa14.68□□□□□ -0.06
CCDC50-201ENST00000392455 A0A1W2PQ67 120 aa14.68□□□□□ -0.06
CCDC50-201ENST00000392455 PRAMEF10O60809 474 aa14.68□□□□□ -0.06
CCDC50-201ENST00000392455 IPO13O94829 963 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms