RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TIE1P35590 1138 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 IRF8Q02556 426 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 TMEM214Q6NUQ4 689 aaKnown RBP16.11■□□□□ 0.17
SHANK1-204ENST00000391814 PRR23BQ6ZRT6 265 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 CACUL1Q86Y37 369 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 SPATA5L1Q9BVQ7 753 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 hCG_2039718K7EN88 272 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 PDLIM1O00151 329 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ARHGDIBP52566 201 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ANKRD52Q8NB46 1076 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 POLE4Q9NR33 117 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 M0QX08 132 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 FPGTO14772 594 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 EGFRP00533 1210 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 THP07101 528 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ITIH1P19827 911 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 CSTF1Q05048 431 aaKnown RBP16.11■□□□□ 0.17
SHANK1-204ENST00000391814 BIKQ13323 160 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF433Q8N7K0 673 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-204ENST00000391814 PCDHB18PQ96TA0 734 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 GIT1Q9Y2X7 761 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ZSCAN5BA6NJL1 495 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 CYP2B6P20813 491 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 MERTKQ12866 999 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 WSCD2Q2TBF2 565 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 TNFAIP8L1Q8WVP5 186 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 BOLA2-SMG1P6H3BVE0 249 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 ZW10O43264 779 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 CPT1AP50416 773 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 PPP4CP60510 307 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 DLG1Q12959 904 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 SLC9B1Q4ZJI4 515 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 OR12D3Q9UGF7 316 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 CABYRO75952 493 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 BMP7P18075 431 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 TGFB2P61812 414 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 SNAPC1Q16533 368 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 LY6KQ17RY6 165 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 ANKRD22Q5VYY1 191 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 ELOVL7A1L3X0 281 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 HOXB8P17481 243 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 THPOP40225 353 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 TMEM53Q6P2H8 277 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 LINGO2Q7L985 606 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 SLC6A15Q9H2J7 730 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 AURKAO14965 403 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 CD36P16671 472 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 IL23RQ5VWK5 629 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF517Q6ZMY9 492 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 BRSK2Q8IWQ3 736 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 FAM151AQ8WW52 585 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 PURBQ96QR8 312 aaKnown RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 CCR10P46092 362 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 SLC18A2Q05940 514 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 ANXA8L1Q5VT79 327 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 PHC3Q8NDX5 983 aa16.1■□□□□ 0.17
SHANK1-204ENST00000391814 AKAP1Q92667 903 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 TEFMQ96QE5 360 aaKnown RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 MRPL45Q9BRJ2 306 aaKnown RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 INTS7Q9NVH2 962 aaKnown RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF490Q9ULM2 529 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-204ENST00000391814 NOMO3P69849 1222 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF267Q14586 743 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 RBM48Q5RL73 367 aaKnown RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 MPP5Q8N3R9 675 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ASB12Q8WXK4 309 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 GTPBP3Q969Y2 492 aaKnown RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 EBF4Q9BQW3 602 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 NXF3Q9H4D5 531 aaKnown RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 RNF19AQ9NV58 838 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 COMMD3Q9UBI1 195 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 CPS1P31327 1500 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 KLHL33A6NCF5 533 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ERBB2P04626 1255 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 GPIP06744 558 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 FUT4P22083 530 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 BTBD16Q32M84 506 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 MND1Q9BWT6 205 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 PCDHAC1Q9H158 963 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 TBC1D17Q9HA65 648 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 STOX2Q9P2F5 926 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ST3GAL5Q9UNP4 418 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 SLC22A1O15245 554 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 KCNQ2O43526 872 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 CHRM5P08912 532 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 PTPN3P26045 913 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 CAP2P40123 477 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 TIGD6Q17RP2 521 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 BBS12Q6ZW61 710 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ZFAND2BQ8WV99 257 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 TCF25Q9BQ70 676 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms