RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PIPSLA2A3N6 862 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 NPIPB15A6NHN6 443 aaPredicted RBP11.72□□□□□ -0.53
SOD1-202ENST00000389995 GADD45BO75293 160 aaPredicted RBP11.72□□□□□ -0.53
SOD1-202ENST00000389995 HEXIM1O94992 359 aaKnown RBP11.72□□□□□ -0.53
SOD1-202ENST00000389995 SOD1P00441 154 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 GPD1P21695 349 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 MMP8P22894 467 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 VIPR1P32241 457 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 MAN1A1P33908 653 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 FASLGP48023 281 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 CSNK1DP48730 415 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 SEPHS1P49903 392 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 PMS2P54278 862 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 GFERP55789 205 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 HHEXQ03014 270 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 PYCR3Q53H96 274 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 CPZQ66K79 652 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 WDR59Q6PJI9 974 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 C6orf15Q6UXA7 325 aaPredicted RBP11.72□□□□□ -0.53
SOD1-202ENST00000389995 MAMDC2Q7Z304 686 aaPredicted RBP11.72□□□□□ -0.53
SOD1-202ENST00000389995 TP53INP2Q8IXH6 220 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 TCTN2Q96GX1 697 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 CHMP5Q9NZZ3 219 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 NOCTQ9UK39 431 aaKnown RBP11.72□□□□□ -0.53
SOD1-202ENST00000389995 ZGRF1Q86YA3 2104 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 DCHS2Q6V1P9 2916 aa11.72□□□□□ -0.53
SOD1-202ENST00000389995 DFFAO00273 331 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 INPP4BO15327 924 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 KRT38O76015 456 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 GFPT2O94808 682 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 KIAA0754O94854 1291 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 CYP1A1P04798 512 aaPredicted RBP11.71□□□□□ -0.53
SOD1-202ENST00000389995 PYGBP11216 843 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 KRT3P12035 628 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 CTPS1P17812 591 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 TNFRSF8P28908 595 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 NOP2P46087 812 aaKnown RBP11.71□□□□□ -0.53
SOD1-202ENST00000389995 GPR1P46091 355 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 TPI1P60174 286 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 FMO1Q01740 532 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 PTP4A2Q12974 167 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 MIIPQ5JXC2 388 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 CBARPQ8N350 705 aaPredicted RBP11.71□□□□□ -0.53
SOD1-202ENST00000389995 SCAMP4Q969E2 229 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 SCARF2Q96GP6 870 aaPredicted RBP11.71□□□□□ -0.53
SOD1-202ENST00000389995 OR6C1Q96RD1 312 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 AGAP2Q99490 1192 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
SOD1-202ENST00000389995 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 SP110Q9HB58 689 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 CUEDC1Q9NWM3 386 aaPredicted RBP11.71□□□□□ -0.53
SOD1-202ENST00000389995 TBC1D29Q9UFV1 150 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 RWDD2AQ9UIY3 292 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 KCNK6Q9Y257 313 aa11.71□□□□□ -0.53
SOD1-202ENST00000389995 ZFHX3Q15911 3703 aa11.71□□□□□ -0.54
SOD1-202ENST00000389995 F8VZ95 297 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 SNX2O60749 519 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 CREG1O75629 220 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 SORBS2O94875 1100 aaKnown RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 CPP00450 1065 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 ATP1A1P05023 1023 aaKnown RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 TYRP1P17643 537 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 NDST2P52849 883 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 RPS18P62269 152 aaKnown RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 SLC10A7Q0GE19 358 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 SEMA5AQ13591 1074 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 MAP7Q14244 749 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 INPP5JQ15735 1006 aaPredicted RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 CA9Q16790 459 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 CHST15Q7LFX5 561 aaPredicted RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 GALNT13Q8IUC8 556 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 RASGRP3Q8IV61 690 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 ARHGAP12Q8IWW6 846 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 PGBD5Q8N414 524 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 NPWQ8N729 165 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 CT55Q8WUE5 264 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 PCDHB18PQ96TA0 734 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 SELENOOQ9BVL4 669 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 ABCG8Q9H221 673 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 AKIRIN1Q9H9L7 192 aaPredicted RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 ZNHIT2Q9UHR6 403 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 LNPEPQ9UIQ6 1025 aa11.7□□□□□ -0.54
SOD1-202ENST00000389995 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
SOD1-202ENST00000389995 SEC16AO15027 2179 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 A6NCN8 305 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 ARHGAP42A6NI28 874 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
SOD1-202ENST00000389995 FGF10O15520 208 aaPredicted RBP11.69□□□□□ -0.54
SOD1-202ENST00000389995 KRT86O43790 486 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 NDUFA10O95299 355 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 TIAF1O95411 115 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 ASMTLO95671 621 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 UCHL3P15374 230 aa11.69□□□□□ -0.54
SOD1-202ENST00000389995 CASP14P31944 242 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms