RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CSNK1DP48730 415 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 HDAC4P56524 1084 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 ELOAQ14241 798 aaKnown RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 ESPL1Q14674 2120 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 PTPRRQ15256 657 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 CHRNA6Q15825 494 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 PYCR3Q53H96 274 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 FAM199XQ6PEV8 388 aaPredicted RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 ARCQ7LC44 396 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 STRADAQ7RTN6 431 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 LZTR1Q8N653 840 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 DTD2Q96FN9 168 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 C9orf72Q96LT7 481 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 TGM7Q96PF1 710 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 SLC39A8Q9C0K1 460 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 ING2Q9H160 280 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 PDFQ9HBH1 243 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 SARS2Q9NP81 518 aaKnown RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 LHX9Q9NQ69 397 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 SIDT1Q9NXL6 827 aaKnown RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 KCTD5Q9NXV2 234 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 KCNK6Q9Y257 313 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 ZDHHC9Q9Y397 364 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 ZNF451Q9Y4E5 1061 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 MED13Q9UHV7 2174 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 C2CD4BA6NLJ0 364 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 WASH4PA8MWX3 477 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 DFFAO00273 331 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 TRAFD1O14545 582 aaPredicted RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 ZNF185O15231 689 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 MT-ND3P03897 115 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 CTPS1P17812 591 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 TNFAIP3P21580 790 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 NFKBIAP25963 317 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 VARSP26640 1264 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 GARSP41250 739 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 MTIF2P46199 727 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 LEPRP48357 1165 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 NOMO3P69849 1222 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 IYDQ6PHW0 289 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 RFLNAQ6ZTI6 216 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 NOP9Q86U38 636 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 TSPAN33Q86UF1 283 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 ZC3H18Q86VM9 953 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 SLC34A3Q8N130 599 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 UMODL1-AS1Q8N2C9 162 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 Q8NA96 180 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 SLC30A5Q8TAD4 765 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 THAP4Q8WY91 577 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 NTAN1Q96AB6 310 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 NSMCE3Q96MG7 304 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 C11orf70Q9BRQ4 267 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 SELENOOQ9BVL4 669 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 UNKQ9C0B0 810 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 SP110Q9HB58 689 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 TBC1D29Q9UFV1 150 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 ITGB1BP2Q9UKP3 347 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 G3BP2Q9UN86 482 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 PCDHGA9Q9Y5G4 932 aaKnown RBP9.56□□□□□ -0.88
IFT88-203ENST00000389373 PCDHGA6Q9Y5G7 932 aa9.56□□□□□ -0.88
IFT88-203ENST00000389373 F5H423 210 aaPredicted RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 DAPK3O43293 454 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 HNRNPRO43390 633 aaKnown RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 LSM8O95777 96 aaKnown RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 RECKO95980 971 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 KRT3P12035 628 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 ACP5P13686 325 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 GPD1P21695 349 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 PTPN9P43378 593 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 NDST2P52849 883 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 EPHA4P54764 986 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 TPI1P60174 286 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 RPS15P62841 145 aaKnown RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 CDK18Q07002 472 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 LRP8Q14114 963 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 IL11RAQ14626 422 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 UGT8Q16880 541 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 ZRANB3Q5FWF4 1079 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 CACHD1Q5VU97 1274 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 SLC6A19Q695T7 634 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 SP5Q6BEB4 398 aaPredicted RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 ARHGAP36Q6ZRI8 547 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 PPP1R3BQ86XI6 285 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 CISD2Q8N5K1 135 aaKnown RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 CENPIQ92674 756 aaPredicted RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 AP2M1Q96CW1 435 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 SNRNP40Q96DI7 357 aaKnown RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 ABCG8Q9H221 673 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 LRRC19Q9H756 370 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 AKIRIN1Q9H9L7 192 aaPredicted RBP9.55□□□□□ -0.88
IFT88-203ENST00000389373 ASF1BQ9NVP2 202 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 FZD10Q9ULW2 581 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
IFT88-203ENST00000389373 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms