RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ZCWPW2A0A1B0GU75 182 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 GOLGA6L3A6NEY3 463 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM202A6NGA9 273 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CBY3A6NI87 242 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PRR32B1ATL7 298 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 H0Y3Z8 333 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TNPO2O14787 897 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 EIF3DO15371 548 aaKnown RBP eCLIP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 BCAT2O15382 392 aaPredicted RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SYNCRIPO60506 623 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SKAP2O75563 359 aaPredicted RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ZFAND5O76080 213 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 EML2O95834 649 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TSHBP01222 138 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TPOP07202 933 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CHRM4P08173 479 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 FAM106CPP0CH98 169 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TRIM49P0CI25 452 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TRIM49CP0CI26 452 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TNNT1P13805 278 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CSF2RAP15509 400 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PTPN2P17706 415 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 GNAZP19086 355 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MSH3P20585 1137 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 EDN2P20800 178 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ZBTB25P24278 435 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 AHRP35869 848 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PTGER3P43115 390 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 METAP2P50579 478 aaKnown RBP eCLIP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PNLIPRP1P54315 467 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 AK2P54819 239 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CLDN2P57739 230 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 COG7P83436 770 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SORDQ00796 357 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PLIN5Q00G26 463 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PPARDQ03181 441 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 GRIK3Q13003 919 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 KCNC3Q14003 757 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SMAD1Q15797 465 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PFKFB4Q16877 469 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 C2orf68Q2NKX9 166 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 GTDC1Q4AE62 458 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 FASTKD1Q53R41 847 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SGO1Q5FBB7 561 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CBWD5Q5RIA9 395 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SULT6B1Q6IMI4 303 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 METTL2BQ6P1Q9 378 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CPLX2Q6PUV4 134 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PP632Q6XCG6 107 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 Q6ZR54 194 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MFSD6Q6ZSS7 791 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 GPRIN3Q6ZVF9 776 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 Q6ZVH6 145 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PIWIL4Q7Z3Z4 852 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 GPAT4Q86UL3 456 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MAP7D3Q8IWC1 876 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SCML4Q8N228 414 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SPATA6LQ8N4H0 392 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 Q8N7P7 452 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ATG16L2Q8NAA4 619 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF527Q8NB42 609 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 BEST2Q8NFU1 509 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 OR5R1Q8NH85 324 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SPPL3Q8TCT6 385 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SLC38A5Q8WUX1 472 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CNOT9Q92600 299 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 RASL10AQ92737 203 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM143Q96AN5 459 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 FBXL8Q96CD0 374 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ORAI1Q96D31 301 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 EID2BQ96D98 161 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 KTI12Q96EK9 354 aaPredicted RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 METTL2AQ96IZ6 378 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MAGED4Q96JG8 741 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PRAC1Q96KF2 57 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MPHOSPH8Q99549 860 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 RHNO1Q9BSD3 238 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 LRRC61Q9BV99 259 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 FGFBP2Q9BYJ0 223 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 LRMDAQ9H2I8 198 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PLEKHA4Q9H4M7 779 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PPP1R3EQ9H7J1 279 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CHODLQ9H9P2 273 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ZBTB20Q9HC78 741 aaPredicted RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MAGEE1Q9HCI5 957 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TRPC7Q9HCX4 862 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 BPIFA1Q9NP55 256 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 MMP25Q9NPA2 562 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 SIX2Q9NPC8 291 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 DDX4Q9NQI0 724 aaKnown RBP0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CHST12Q9NRB3 414 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TCP11L1Q9NUJ3 509 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 C2orf42Q9NWW7 574 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 PTTG2Q9NZH5 202 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM181Q9P2C4 612 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 LRWD1Q9UFC0 647 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 ZDHHC2Q9UIJ5 367 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 CDC23Q9UJX2 597 aa0.49□□□□□ -2.33
SNORD28-201ENST00000384706 FBXO9Q9UK97 447 aaPredicted RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms