RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ARFGAP1Q8N6T3 406 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 SLC37A2Q8TED4 501 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
VCX3A-201ENST00000381089 APOBEC4Q8WW27 367 aaKnown RBP15.9■□□□□ 0.14
VCX3A-201ENST00000381089 RTP4Q96DX8 246 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 NSMCE3Q96MG7 304 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 HAUS2Q9NVX0 235 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 TAS2R14Q9NYV8 317 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 PDP2Q9P2J9 529 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 CD84Q9UIB8 345 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 MYO6Q9UM54 1294 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 TMEM98Q9Y2Y6 226 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 ST14Q9Y5Y6 855 aa15.9■□□□□ 0.14
VCX3A-201ENST00000381089 ZFC3H1O60293 1989 aaKnown RBP15.89■□□□□ 0.13
VCX3A-201ENST00000381089 A8MU76 341 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 LRCH4O75427 683 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 MAP3K6O95382 1288 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 ASMTLO95671 621 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 CTPS1P17812 591 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 PCK1P35558 622 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 EPHB1P54762 984 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 MAXP61244 160 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 FOXK1P85037 733 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 MC2RQ01718 297 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 MYL5Q02045 173 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 HHEXQ03014 270 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 ABHD18Q0P651 414 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 DPYSL2Q16555 572 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 BOLA3Q53S33 107 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 LRRC66Q68CR7 880 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 PGBD5Q8N414 524 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 BMPERQ8N8U9 685 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 AVL9Q8NBF6 648 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 EXD1Q8NHP7 514 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 TRIM11Q96F44 468 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.89■□□□□ 0.13
VCX3A-201ENST00000381089 ABCG8Q9H221 673 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 MRPL47Q9HD33 250 aaKnown RBP15.89■□□□□ 0.13
VCX3A-201ENST00000381089 FBXO8Q9NRD0 319 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 CNOT8Q9UFF9 292 aaKnown RBP15.89■□□□□ 0.13
VCX3A-201ENST00000381089 PPIL1Q9Y3C6 166 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 PLEKHM1Q9Y4G2 1056 aa15.89■□□□□ 0.13
VCX3A-201ENST00000381089 FLNCQ14315 2725 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 TRBV23OR9-2A0A075B6M9 112 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 NKX2-8O15522 239 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 MAFKO60675 156 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 PEX11BO96011 259 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 CA4P22748 312 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 TYRO3Q06418 890 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 ITKQ08881 620 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 NCAPHQ15003 741 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 STX1AQ16623 288 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 CYP4V2Q6ZWL3 525 aaPredicted RBP15.88■□□□□ 0.13
VCX3A-201ENST00000381089 IRF2BP2Q7Z5L9 587 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 SLC9B2Q86UD5 537 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 ZNF761Q86XN6 746 aaPredicted RBP15.88■□□□□ 0.13
VCX3A-201ENST00000381089 LRRC49Q8IUZ0 686 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 TP53INP2Q8IXH6 220 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 NCSTNQ92542 709 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 HSPH1Q92598 858 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 ZNF653Q96CK0 615 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 CTRCQ99895 268 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 HERPUD2Q9BSE4 406 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 EPB41L1Q9H4G0 881 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 SARS2Q9NP81 518 aaKnown RBP15.88■□□□□ 0.13
VCX3A-201ENST00000381089 ZNF71Q9NQZ8 489 aaPredicted RBP15.88■□□□□ 0.13
VCX3A-201ENST00000381089 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 ZNHIT2Q9UHR6 403 aa15.88■□□□□ 0.13
VCX3A-201ENST00000381089 LRRC10BA6NIK2 292 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 POLR1CO15160 346 aaPredicted RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 STK17BO94768 372 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 SOD1P00441 154 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 FTLP02792 175 aaPredicted RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 MYBL1P10243 752 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 GZMAP12544 262 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 GP1BBP13224 206 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 TCN2P20062 427 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 AMPD1P23109 780 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 CES1P23141 567 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 MAPK9P45984 424 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 EPHA4P54764 986 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 NFATC2Q13469 925 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 ASIC2Q16515 512 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 SMTNL2Q2TAL5 461 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 DEFB109BQ30KR1 87 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 CRTC2Q53ET0 693 aaPredicted RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 LACTB2Q53H82 288 aaPredicted RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 ARHGAP22Q7Z5H3 698 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 POLNQ7Z5Q5 900 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 TRIM74Q86UV6 250 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 RAVER1Q8IY67 606 aaKnown RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 ESX1Q8N693 406 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 PIH1D2Q8WWB5 315 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 STARD8Q92502 1023 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 SCAMP4Q969E2 229 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 CSPG4P5Q96PW8 444 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 POLR1EQ9GZS1 481 aaKnown RBP15.87■□□□□ 0.13
VCX3A-201ENST00000381089 NT5MQ9NPB1 228 aa15.87■□□□□ 0.13
VCX3A-201ENST00000381089 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms