RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 COMMD10Q9Y6G5 202 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 A0A1B0GTL3 188 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 SRP72O76094 671 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 STAU1O95793 577 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 THP07101 528 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 SNRPB2P08579 225 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 GPR15P49685 360 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 GALNT2Q10471 571 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 PTPRRQ15256 657 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 DDR2Q16832 855 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 RABL3Q5HYI8 236 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 NHSL2Q5HYW2 709 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 ALKAL1Q6UXT8 129 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 LRRTM3Q86VH5 581 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 DHFR2Q86XF0 187 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 KIAA2013Q8IYS2 634 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 GPR78Q96P69 363 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 MUC3BQ9H195 1237 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 RCOR3Q9P2K3 495 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 TRHDEQ9UKU6 1024 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 CNTN5O94779 1100 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 ATP6V1B2P21281 511 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 PNPLA4P41247 253 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 CDKN2DP55273 166 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 LRP8Q14114 963 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 INAVAQ3KP66 663 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 HMBOX1Q6NT76 420 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 CHSY3Q70JA7 882 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 PEX5LQ8IYB4 626 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 PARP8Q8N3A8 854 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 PAF1Q8N7H5 531 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 PTGR2Q8N8N7 351 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 TMEM74Q96NL1 305 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 ADARB2Q9NS39 739 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 GPSM3Q9Y4H4 160 aa12.43□□□□□ -0.42
PRPF40B-202ENST00000380281 MAGEB16A2A368 324 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 ZNF701M0R085 212 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 B4GAT1O43505 415 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 NRP2O60462 931 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 IPO13O94829 963 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 HAPLN1P10915 354 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 GGT5P36269 586 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 MAGEA12P43365 314 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 RAD23AP54725 363 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 DIO3P55073 304 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 STX5Q13190 355 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 UGP2Q16851 508 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 DENND5AQ6IQ26 1287 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 RETREG3Q86VR2 466 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 DLG3Q92796 817 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 SLC2A13Q96QE2 648 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 TP63Q9H3D4 680 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 NOL6Q9H6R4 1146 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 NANOGQ9H9S0 305 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 MOSPD1Q9UJG1 213 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CNOT6Q9ULM6 557 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 AAR2Q9Y312 384 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 TCAF1Q9Y4C2 921 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 TRPC5OSA6NMA1 111 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 APOA4P06727 396 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 IFITM3Q01628 133 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CLCQ05315 142 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 TNK2Q07912 1038 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 FOXD4Q12950 439 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CXCL17Q6UXB2 119 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 OR13C4Q8NGS5 318 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 BHMTQ93088 406 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 NT5C3BQ969T7 300 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 SLCO4A1Q96BD0 722 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 EFHD2Q96C19 240 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 ACOX2Q99424 681 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 MRPL57Q9BQC6 102 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 KIFC1Q9BW19 673 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 DNAI2Q9GZS0 605 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 RGS17Q9UGC6 210 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CNOT11Q9UKZ1 510 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 PRG3Q9Y2Y8 225 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 ARL5AQ9Y689 179 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 HTTP42858 3142 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 A0A0J9YYE9 177 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 SNAP91O60641 907 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 TOMM70O94826 608 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CAPNS1P04632 268 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CHRNB1P11230 501 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 OXTRP30559 389 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 EFEMP1Q12805 493 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 HECTD2Q5U5R9 776 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 LINC00523Q86TU6 105 aa12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 RALGPS2Q86X27 583 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-202ENST00000380281 CFAP52Q8N1V2 620 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms