RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TMEM221A6NGB7 291 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 LRRC14BA6NHZ5 514 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 F8W8V4 182 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 GPR39O43194 453 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 TGM5O43548 720 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 OR1I1O60431 355 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 CNPP09543 421 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 PPARGP37231 505 aaPredicted RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 SUOXP51687 545 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 CDH13P55290 713 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 C1QTNF8P60827 252 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 RHOAP61586 193 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 ZNF678Q5SXM1 525 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 C6orf163Q5TEZ5 329 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PAQR3Q6TCH7 311 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 Q6ZNB5 142 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 SLC22A9Q8IVM8 553 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 TRIM43Q96BQ3 446 aaPredicted RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 CCDC124Q96CT7 223 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 ALG14Q96F25 216 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 MAELQ96JY0 434 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 ADGRE3Q9BY15 652 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 TM6SF2Q9BZW4 377 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PREBQ9HCU5 417 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PACSIN3Q9UKS6 424 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PAIP2BQ9ULR5 123 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 CLEC4EQ9ULY5 219 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PCDHB9Q9Y5E1 797 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 RGSL1A5PLK6 1076 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 UBXN8O00124 270 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 NDUFS3O75489 264 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 SRP72O76094 671 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 SIX3O95343 332 aaPredicted RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 CES1P23141 567 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 MC4RP32245 332 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 MRPS35P82673 323 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 SLC34A1Q06495 639 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 UNC50Q53HI1 259 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 CLEC6AQ6EIG7 209 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PGM2L1Q6PCE3 622 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 OTOP2Q7RTS6 562 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 CMTR2Q8IYT2 770 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 CPSF7Q8N684 471 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 HJURPQ8NCD3 748 aaPredicted RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 ACTRT2Q8TDY3 377 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 RTKNQ9BST9 563 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 EML4Q9HC35 981 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 INTS10Q9NVR2 710 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 STX18Q9P2W9 335 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 STOML1Q9UBI4 398 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 CDH22Q9UJ99 828 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 IKZF3Q9UKT9 509 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 COPG1Q9Y678 874 aaKnown RBP14.8□□□□□ -0.04
PRNP-201ENST00000379440 GMEB1Q9Y692 573 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 PLXNA4Q9HCM2 1894 aa14.8□□□□□ -0.04
PRNP-201ENST00000379440 TRPC5OSA6NMA1 111 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 GFRA2O00451 464 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PPP6CO00743 305 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 LILRB3O75022 631 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 OLFM2O95897 454 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 THRAP10827 490 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 CTPS1P17812 591 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 TBL3Q12788 808 aaKnown RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 TAF11Q15544 211 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PABPC1LQ4VXU2 614 aaKnown RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 HPS6Q86YV9 775 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 DDI1Q8WTU0 396 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PAWRQ96IZ0 340 aaKnown RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 SLC30A3Q99726 388 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 TRPV5Q9NQA5 729 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 SMAD6O43541 496 aaKnown RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 PENKP01210 267 aaPredicted RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 CKMP06732 381 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 MTHFD2P13995 350 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 RFC2P35250 354 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 NUDT2P50583 147 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PPP1R3AQ16821 1122 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PTPRNQ16849 979 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PFKFB4Q16877 469 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 INO80DQ53TQ3 878 aaPredicted RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 ZRANB3Q5FWF4 1079 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 FBXO48Q5FWF7 155 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 TCHHL1Q5QJ38 904 aaPredicted RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 ZNF783Q6ZMS7 281 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 TPGS1Q6ZTW0 290 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 ITIH5Q86UX2 942 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 CAMK1DQ8IU85 385 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 PTGR2Q8N8N7 351 aaPredicted RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 GPR21Q99679 349 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 STX7O15400 261 aaKnown RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 FGF18O76093 207 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 ALPIP09923 528 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 GKP32189 559 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 POLE2P56282 527 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
PRNP-201ENST00000379440 BBS7Q8IWZ6 715 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 TTC30BQ8N4P2 665 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 CEP70Q8NHQ1 597 aa14.79□□□□□ -0.04
PRNP-201ENST00000379440 EID2BQ96D98 161 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms