RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ZNF781Q8N8C0 355 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 ITFG1Q8TB96 612 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 LENG8Q96PV6 779 aaPredicted RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 AGAP2Q99490 1192 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TRMOQ9BU70 441 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 FBXL21Q9UKT6 434 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 CAPN8A6NHC0 703 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 RPP40O75818 363 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 ETS2P15036 469 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF544Q6NX49 715 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 KLHL17Q6TDP4 642 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 KIAA1324Q6UXG2 1013 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 FAM228AQ86W67 206 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 S100ZQ8WXG8 99 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 GATA5Q9BWX5 397 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 NUAK2Q9H093 628 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 MAGEH1Q9H213 219 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 ADPRHL2Q9NX46 363 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 DEC1Q9P2X7 70 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 ATXN10Q9UBB4 475 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 GUCY1B2O75343 617 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 MT-CYBP00156 380 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 ELFN1P0C7U0 828 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 TNNI3P19429 210 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 RPS7P62081 194 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 DSC2Q02487 901 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 HNRNPDQ14103 355 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 RALGPS1Q5JS13 557 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 BROXQ5VW32 411 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 CUZD1Q86UP6 607 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 CRYBG2Q8N1P7 616 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 SFRP1Q8N474 314 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 RTL3Q8N8U3 475 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 MAGEE2Q8TD90 523 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 OR8D1Q8WZ84 308 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 NLNQ9BYT8 704 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 ANAPC2Q9UJX6 822 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 AP4B1Q9Y6B7 739 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 MYH13Q9UKX3 1938 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 PTGES3LE9PB15 166 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 HMGB3O15347 200 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 SGTAO43765 313 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 EPN2O95208 641 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 PBX3P40426 434 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 SLC7A2P52569 658 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 MPP2Q14168 576 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 TCEAL1Q15170 157 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 NEK10Q6ZWH5 1172 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 OR7A2PQ8NGA2 310 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 SMG7Q92540 1137 aaKnown RBP14.99□□□□□ -0.01
NPHP4-201ENST00000378156 TRAF6Q9Y4K3 522 aa14.99□□□□□ -0.01
NPHP4-201ENST00000378156 EFCAB10A6NFE3 127 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 PKMP14618 531 aaKnown RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 RPL17P18621 184 aaKnown RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ABRQ12979 859 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 PRKG2Q13237 762 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 DPYSL2Q16555 572 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CPSF6Q16630 551 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ACSBG2Q5FVE4 666 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 C11orf88Q6PI97 169 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CASP12Q6UXS9 341 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 FBXO22Q8NEZ5 403 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 OR7D4Q8NG98 312 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 TPD52L3Q96J77 140 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF395Q9H8N7 513 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 SLC28A3Q9HAS3 691 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ZFP14Q9HCL3 533 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 EGFL7Q9UHF1 273 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ZNHIT2Q9UHR6 403 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 FZD10Q9ULW2 581 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 TBC1D30Q9Y2I9 924 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ARIH1Q9Y4X5 557 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 KCNE2Q9Y6J6 123 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 GOLGA4Q13439 2230 aaKnown RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 IL6P05231 212 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 UGT2B4P06133 528 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 LINC00032P0C843 101 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 COL6A2P12110 1019 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 NELFEP18615 380 aaKnown RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 NMBRP28336 390 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CENPAP49450 140 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 MAPKAPK3Q16644 382 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 RNF220Q5VTB9 566 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF57Q68EA5 555 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 LDB1Q86U70 411 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ADHFE1Q8IWW8 467 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF358Q9NW07 568 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CRNNQ9UBG3 495 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 EVLQ9UI08 416 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 PPEF2O14830 753 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 MAPKAPK2P49137 400 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CDH4P55283 916 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 GRB14Q14449 540 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 DGKKQ5KSL6 1271 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 SCAMP5Q8TAC9 235 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 UBASH3BQ8TF42 649 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 DGCR14Q96DF8 476 aaKnown RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 DNAJC28Q9NX36 388 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 RPS6KB2Q9UBS0 482 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 SRRDQ9UH36 339 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms