RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 HTR1AP08908 422 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 INSRRP14616 1297 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 JUNBP17275 347 aaPredicted RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 IMPDH1P20839 514 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 S100A1P23297 94 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 OR4D2P58180 307 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 VBP1P61758 197 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 DPY19L1Q2PZI1 675 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 PLA2G4EQ3MJ16 856 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 RNF19BQ6ZMZ0 732 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 PSMA8Q8TAA3 256 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.82■□□□□ 0.124e-11■■■■■ 51
CKAP4-201ENST00000378026 CNDP2Q96KP4 475 aaKnown RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 FSD1LQ9BXM9 530 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 ALOXE3Q9BYJ1 711 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 KLK14Q9P0G3 267 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 A0A1B0GTL3 188 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 RBP1P09455 135 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 GSTM2P28161 218 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 LEPRP48357 1165 aaKnown RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 MAP3K7CLP57077 242 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 TUBA3CQ13748 450 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 DGCR6Q14129 220 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 ACAP2Q15057 778 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 PFKFB4Q16877 469 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 ADCK1Q86TW2 530 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 PTGR2Q8N8N7 351 aaPredicted RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 C2CD4AQ8NCU7 369 aaPredicted RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 OR7A2PQ8NGA2 310 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 C12orf42Q96LP6 360 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 WDR12Q9GZL7 423 aaKnown RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 MIR1-1HGQ9H1L0 117 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 HPS4Q9NQG7 708 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 HACD3Q9P035 362 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 AASSQ9UDR5 926 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 ADAMTS5Q9UNA0 930 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 PDE10AQ9Y233 779 aa15.82■□□□□ 0.12
CKAP4-201ENST00000378026 OAS3Q9Y6K5 1087 aaKnown RBP15.82■□□□□ 0.12
CKAP4-201ENST00000378026 DAB1O75553 588 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 CDK14O94921 469 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 C7P10643 843 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 BMP4P12644 408 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 TGM1P22735 817 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 CXCL9Q07325 125 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 TMEM207Q6UWW9 146 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 SAMD7Q7Z3H4 446 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 FBXO16Q8IX29 292 aaPredicted RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ABI1Q8IZP0 508 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 TTC16Q8NEE8 873 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 OR6P1Q8NGX9 317 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 NUDT8Q8WV74 236 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 OSCP1Q8WVF1 389 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ITCHQ96J02 903 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 MED10Q9BTT4 135 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 NTN4Q9HB63 628 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 AKIP1Q9NQ31 210 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 GMIPQ9P107 970 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 PNMA8BQ9ULN7 279 aaPredicted RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 MSI1O43347 362 aaKnown RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 LRIG2O94898 1065 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 AKAP5P24588 427 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 PIGAP37287 484 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 SEPHS1P49903 392 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 TKTL1P51854 596 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 KCNK10P57789 538 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ADAM17P78536 824 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 DAG1Q14118 895 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 SKIV2LQ15477 1246 aaKnown RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 AGAP7PQ5VUJ5 663 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 GLYATQ6IB77 296 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 CCDC81Q6ZN84 652 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 KIAA2013Q8IYS2 634 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 DCP1BQ8IZD4 617 aaKnown RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 PPP1R13LQ8WUF5 828 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 RNF34Q969K3 372 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ZNF419Q96HQ0 510 aaPredicted RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 HSFY1Q96LI6 401 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ABCB10Q9NRK6 738 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 OR12D3Q9UGF7 316 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 GJD2Q9UKL4 321 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ERVK-11Q9UQG0 969 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 YJEFN3A6XGL0 299 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 H0YAE9 185 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 XPNPEP2O43895 674 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 CRCPO75575 148 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 S100BP04271 92 aaPredicted RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 HRH2P25021 359 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 CTU2Q2VPK5 515 aaKnown RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 HECTD2Q5U5R9 776 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 GADL1Q6ZQY3 521 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 SLC22A9Q8IVM8 553 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 CNTN4Q8IWV2 1026 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 SCML4Q8N228 414 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 MAGED4Q96JG8 741 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 NSMCE2Q96MF7 247 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 ZNF641Q96N77 438 aaPredicted RBP15.81■□□□□ 0.12
CKAP4-201ENST00000378026 TUBB1Q9H4B7 451 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 AS3MTQ9HBK9 375 aa15.81■□□□□ 0.12
CKAP4-201ENST00000378026 OR51F1A6NGY5 319 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms