RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CD3EAPO15446 510 aaKnown RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 CLASP2O75122 1294 aaKnown RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 LBPP18428 481 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 NRG1Q02297 640 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 TMED1Q13445 227 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 GALNT3Q14435 633 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 FSCN1Q16658 493 aaKnown RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 MS4A13Q5J8X5 152 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 TMEM125Q96AQ2 219 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 C12orf43Q96C57 262 aaKnown RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 BIRC8Q96P09 236 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 SERPINB11Q96P15 392 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 KATNAL1Q9BW62 490 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 SEMA4BQ9NPR2 832 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 CPA4Q9UI42 421 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 MYO16Q9Y6X6 1858 aa13.18□□□□□ -0.3
ACTN1-202ENST00000376839 ZFC3H1O60293 1989 aaKnown RBP13.18□□□□□ -0.3
ACTN1-202ENST00000376839 M0QZQ0 153 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 MATN4O95460 622 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GLP2RO95838 553 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 EEF1DP29692 281 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GPR15P49685 360 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GSK3BP49841 420 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SCNN1BP51168 640 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TSPY1Q01534 308 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 BNIP2Q12982 314 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 RPS6KA2Q15349 733 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 CYP51A1Q16850 503 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 BLOC1S3Q6QNY0 202 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 RAB44Q7Z6P3 723 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GPR180Q86V85 440 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 IGSF8Q969P0 613 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TADA1Q96BN2 335 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.35e-7■■■■□ 24
ACTN1-202ENST00000376839 DOCK4Q8N1I0 1966 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 BRCA2P51587 3418 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 LOC285095A0A1B0GVY8 99 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 MUSKO15146 869 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 RHOQP17081 205 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 VARSP26640 1264 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 PRDX3P30048 256 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 ENTPD1P49961 510 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SUOXP51687 545 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 ZBED5Q49AG3 693 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 DUS1LQ6P1R4 473 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TRPV3Q8NET8 790 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 31.4
ACTN1-202ENST00000376839 C1orf74Q96LT6 269 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SEMA3CQ99985 751 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 C9orf16Q9BUW7 83 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 ZYG11BQ9C0D3 744 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GID8Q9NWU2 228 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GPR45Q9Y5Y3 372 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SUPT3HB4E1H0 165 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SUPT3HO75486 399 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 ACVR1Q04771 509 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 CLCQ05315 142 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 MAP2K5Q13163 448 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 NFYCQ13952 458 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 FUT11Q495W5 492 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 MORN1Q5T089 497 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SCIMPQ6UWF3 145 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 DCP1BQ8IZD4 617 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TMEM74Q96NL1 305 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 NPLQ9BXD5 320 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TMEM248Q9NWD8 314 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TUBA8Q9NY65 449 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TLR6Q9Y2C9 796 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 GMEB1Q9Y692 573 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 OAS3Q9Y6K5 1087 aaKnown RBP13.17□□□□□ -0.3
ACTN1-202ENST00000376839 V9GYQ6 96 aa13.17□□□□□ -0.3
ACTN1-202ENST00000376839 TCRBV5S2A0A599 114 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 TRIM64A6NGJ6 449 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 TNPO2O14787 897 aaKnown RBP13.16□□□□□ -0.3
ACTN1-202ENST00000376839 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 RASAL1O95294 804 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 TBX18O95935 607 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 ZFP36L2P47974 494 aaKnown RBP13.16□□□□□ -0.3
ACTN1-202ENST00000376839 TBX4P57082 545 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 ESRRGP62508 458 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 SLC39A12Q504Y0 691 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 C9orf131Q5VYM1 1079 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 GDF6Q6KF10 455 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-202ENST00000376839 MSANTD2Q6P1R3 559 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 DHRS4L2Q6PKH6 230 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
ACTN1-202ENST00000376839 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms