RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 IQCB1Q15051 598 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 PYCR3Q53H96 274 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 NCBP2-AS2Q69YL0 99 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 NYAP1Q6ZVC0 841 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 H2AFVQ71UI9 128 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 TSPAN33Q86UF1 283 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 DTX1Q86Y01 620 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 NAGSQ8N159 534 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 PELI3Q8N2H9 469 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 HDAC11Q96DB2 347 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 CCDC74BQ96LY2 380 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 NSMCE3Q96MG7 304 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 HERPUD2Q9BSE4 406 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-204ENST00000376643 ABCG8Q9H221 673 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 SEMA6CQ9H3T2 930 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 RDH14Q9HBH5 336 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 PCDH9Q9HC56 1237 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 CTTNBP2NLQ9P2B4 639 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 KIF26BQ2KJY2 2108 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 ZNF462Q96JM2 2506 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 IGHV1OR21-1A0A087WYE8 117 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 A0A087X0T9 212 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 IGHV5-10-1A0A0J9YXX1 117 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 OR5K4A6NMS3 321 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 B4E171 279 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 GPR89AB7ZAQ6 455 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 CASC3O15234 703 aaKnown RBP14.66□□□□□ -0.06
HDAC6-204ENST00000376643 PROSCO94903 275 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 ASMTLO95671 621 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 FAM228BP0C875 321 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 GPR89BP0CG08 455 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 CD1CP29017 333 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 TSPAN7P41732 249 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 PTSQ03393 145 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 C16orf72Q14CZ0 275 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 ANKRD20A8PQ5CZ79 823 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 TMEM71Q6P5X7 295 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 SLC9B2Q86UD5 537 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 VSIG1Q86XK7 387 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 SRPK1Q96SB4 655 aaKnown RBP14.66□□□□□ -0.06
HDAC6-204ENST00000376643 NUDT22Q9BRQ3 303 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 ZPBPQ9BS86 351 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 EFHD1Q9BUP0 239 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 PCDHGA4Q9Y5G9 962 aa14.66□□□□□ -0.06
HDAC6-204ENST00000376643 MGAQ8IWI9 3026 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 ZNF487B1APH4 448 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 C9orf172C9J069 976 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 SLC28A2O43868 658 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 PDHA1P08559 390 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 THRAP10827 490 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 PTMSP20962 102 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 IL4RP24394 825 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 PBX1P40424 430 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 EPHA4P54764 986 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 TRIM14Q14142 442 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 TGIF1Q15583 401 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 ODF2Q5BJF6 829 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 DCAF12Q5T6F0 453 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 TXNRD3NBQ6F5E7 133 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 ZFAND4Q86XD8 727 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 CCDC13Q8IYE1 715 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 SFRP1Q8N474 314 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 IL22RA1Q8N6P7 574 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 CCNYQ8ND76 341 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 LPCAT1Q8NF37 534 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-204ENST00000376643 FAF2Q96CS3 445 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 COX14Q96I36 57 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 BTBD6Q96KE9 485 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 MLPHQ9BV36 600 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-204ENST00000376643 RIOK2Q9BVS4 552 aaKnown RBP14.65□□□□□ -0.06
HDAC6-204ENST00000376643 DEF6Q9H4E7 631 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 FAM83DQ9H4H8 585 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 SARS2Q9NP81 518 aaKnown RBP14.65□□□□□ -0.06
HDAC6-204ENST00000376643 ZNHIT6Q9NWK9 470 aaKnown RBP14.65□□□□□ -0.06
HDAC6-204ENST00000376643 FOXJ2Q9P0K8 574 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 CD84Q9UIB8 345 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 CHKBQ9Y259 395 aa14.65□□□□□ -0.06
HDAC6-204ENST00000376643 KIR2DS5A0A0G2JLQ3 304 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 A0A0G2JNG1 304 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 KIR2DS3K7RE56 304 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 SOD1P00441 154 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 FUCA1P04066 466 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 TPM1P09493 284 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 ZFXP17010 805 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-204ENST00000376643 GJC1P36383 396 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 ETV5P41161 510 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 POLD2P49005 469 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 ARSEP51690 589 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 DSC2Q02487 901 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 HHEXQ03014 270 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 KIR2DS5Q14953 304 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 PDPK2PQ6A1A2 396 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 WDR74Q6RFH5 385 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-204ENST00000376643 MARK2Q7KZI7 788 aaKnown RBP14.64□□□□□ -0.07
HDAC6-204ENST00000376643 TMPRSS9Q7Z410 1059 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 PHYKPLQ8IUZ5 450 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms