RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 OCMP0CE72 109 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KCNC1P48547 511 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 STXBP5Q5T5C0 1151 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GLYATQ6IB77 296 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 EGFL6Q8IUX8 553 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CARNMT1Q8N4J0 409 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LZTR1Q8N653 840 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MRGPRX2Q96LB1 330 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PRICKLE1Q96MT3 831 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 BOLA2-SMG1P6H3BVE0 249 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SNAP29O95721 258 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 INHBCP55103 352 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 NUP107P57740 925 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RPS24P62847 133 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 DAB2P98082 770 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SIM2Q14190 667 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 AASDHQ4L235 1098 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLC2A7Q6PXP3 512 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SZRD1Q7Z422 152 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MFSD6LQ8IWD5 586 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 AHI1Q8N157 1196 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TMEM86AQ8N2M4 240 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 BRI3BPQ8WY22 251 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FCRL5Q96RD9 977 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OSBPL2Q9H1P3 480 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RIBC2Q9H4K1 309 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SYTL2Q9HCH5 934 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SCUBE2Q9NQ36 999 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CHCHD3Q9NX63 227 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PCDHB9Q9Y5E1 797 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PCDHGA7Q9Y5G6 932 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RSL1D1O76021 490 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ZNF182P17025 639 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PRDX3P30048 256 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 AXLP30530 894 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 GDF5P43026 501 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OXCT1P55809 520 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SH3BP2P78314 561 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MRPS6P82932 125 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SIRPB2Q5JXA9 342 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KCTD8Q6ZWB6 473 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ZDHHC13Q8IUH4 622 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 HS6ST3Q8IZP7 471 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 PNPT1Q8TCS8 783 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 GDAP2Q9NXN4 497 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 VPS4AQ9UN37 437 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OXTRP30559 389 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ADSLP30566 484 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLC5A2P31639 672 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ARMC12Q5T9G4 340 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ADGRG6Q86SQ4 1221 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MICU2Q8IYU8 434 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MARVELD2Q8N4S9 558 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TTC9BQ8N6N2 239 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OR10T2Q8NGX3 314 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLC9A7Q96T83 725 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 BDH2Q9BUT1 245 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CHID1Q9BWS9 393 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 NMRK2Q9NPI5 230 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLAMF8Q9P0V8 285 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RIMS3Q9UJD0 308 aa14.33□□□□□ -0.12
TNFRSF1B-201ENST00000376259 TMX2-CTNND1H3BSU7 103 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ARPC2O15144 300 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLC22A3O75751 556 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CPSF4O95639 269 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 NTRK1P04629 796 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 IL7RP16871 459 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SLC7A1P30825 629 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 HPCAP84074 193 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 DUSP4Q13115 394 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 SPIDRQ14159 915 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FAM91A1Q658Y4 838 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ADCK1Q86TW2 530 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CPSF7Q8N684 471 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 NTAN1Q96AB6 310 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 C12orf43Q96C57 262 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 KDM1AO60341 852 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MAFKO60675 156 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ATP6V1G1O75348 118 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 COL6A2P12110 1019 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 RPL17P18621 184 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 DNAJB2P25686 324 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ELK4P28324 431 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 GJA5P36382 358 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CASP9P55211 416 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 HMGCS1Q01581 520 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MERTKQ12866 999 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ADRM1Q16186 407 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 CMPK2Q5EBM0 449 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 OTUD1Q5VV17 481 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 FAM45BPQ6NSW5 357 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
TNFRSF1B-201ENST00000376259 C11orf74Q86VG3 221 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms