RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 GALNT4Q8N4A0 578 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 GPR150Q8NGU9 434 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 OR4L1Q8NH43 312 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 FAM45AQ8TCE6 357 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 PEX13Q92968 403 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 AGO1Q9UL18 857 aaKnown RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 PAIP2BQ9ULR5 123 aaKnown RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 SPO11Q9Y5K1 396 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 RGSL1A5PLK6 1076 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 TIAL1Q01085 375 aaKnown RBP eCLIP13.95□□□□□ -0.182e-9■■■■□ 19.7
MSH5-202ENST00000375740 CYTH1Q15438 398 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 PPM1LQ5SGD2 360 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 MRNIPQ6NTE8 343 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 NCCRP1Q6ZVX7 275 aaPredicted RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 ISCA2Q86U28 154 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 PQLC1Q8N2U9 271 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 RMDN1Q96DB5 314 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 CDKN2AIPNLQ96HQ2 116 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 MARK4Q96L34 752 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 MRPS26Q9BYN8 205 aaKnown RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 ZNF385DQ9H6B1 395 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 FAIMQ9NVQ4 179 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 FIS1Q9Y3D6 152 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 ILVBLA1L0T0 632 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 CBX4O00257 560 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 AIM2O14862 343 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 INSIG1O15503 277 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 ABLIM3O94929 683 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 ENTPD1P49961 510 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 ATXN3P54252 364 aaPredicted RBP13.94□□□□□ -0.18
MSH5-202ENST00000375740 PLD1Q13393 1074 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 APOFQ13790 326 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 TAF12Q16514 161 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 ADGRF1Q5T601 910 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 SNX32Q86XE0 403 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 SMIM14Q96QK8 99 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 TNFRSF12AQ9NP84 129 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 DOLKQ9UPQ8 538 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 SDHDO14521 159 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 PEX1O43933 1283 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 FDXRP22570 491 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 PPARGP37231 505 aaPredicted RBP13.94□□□□□ -0.18
MSH5-202ENST00000375740 SPOUT1Q5T280 376 aaKnown RBP13.94□□□□□ -0.18
MSH5-202ENST00000375740 RNF219Q5W0B1 726 aaPredicted RBP13.94□□□□□ -0.18
MSH5-202ENST00000375740 SMYD1Q8NB12 490 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 STON2Q8WXE9 905 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 KLF16Q9BXK1 252 aaPredicted RBP13.94□□□□□ -0.18
MSH5-202ENST00000375740 SCUBE2Q9NQ36 999 aa13.94□□□□□ -0.18
MSH5-202ENST00000375740 TRPC5OSA6NMA1 111 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 PRLP01236 227 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 CR2P20023 1033 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 SLC26A3P40879 764 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 VEGFBP49765 207 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 PHEXP78562 749 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 KCTD21Q4G0X4 260 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 CPNE9Q8IYJ1 553 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 LILRA2Q8N149 483 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 RP9Q8TA86 221 aaKnown RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 PTERQ96BW5 349 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 RMI1Q9H9A7 625 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 NLE1Q9NVX2 485 aaPredicted RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 RIMKLBQ9ULI2 386 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 TRIM43BA6NCK2 446 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 IMPDH1P20839 514 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 NAA20P61599 178 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 RFTN1Q14699 578 aaPredicted RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 EML3Q32P44 896 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 ELMSAN1Q6PJG2 1045 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 Q6ZNX1 250 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 SETD3Q86TU7 594 aaPredicted RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 CUZD1Q86UP6 607 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 SLC22A9Q8IVM8 553 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 FBXW8Q8N3Y1 598 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 MDGA1Q8NFP4 955 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 OR4K2Q8NGD2 314 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 JADE3Q92613 823 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 MAELQ96JY0 434 aaKnown RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 ZNF696Q9H7X3 374 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 EML4Q9HC35 981 aaKnown RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 PAK6Q9NQU5 681 aaPredicted RBP13.93□□□□□ -0.18
MSH5-202ENST00000375740 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 PCDHGC4Q9Y5F7 938 aa13.93□□□□□ -0.18
MSH5-202ENST00000375740 MICAL3Q7RTP6 2002 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 A0A1B0GVM2 712 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 ARHGAP10A1A4S6 786 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 TCAF2A6NFQ2 919 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 SCAMP3O14828 347 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 TNFAIP8O95379 198 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 CD1DP15813 335 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms