RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 UBR5O95071 2799 aaPredicted RBP12.16□□□□□ -0.46
LSM2-208ENST00000375661 PRAMEF33A0A0G2JMD5 474 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 TCRBV7S2A1N4TA0A589 114 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 TSPAN11A1L157 253 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 CFAP69A5D8W1 941 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 APOC4-APOC2K7ER74 178 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 FANCGO15287 622 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 PRAMEF10O60809 474 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 APOC2P02655 101 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 NTRK1P04629 796 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 FAM87AP0C7U9 286 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 HGFP14210 728 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 CCNCP24863 283 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 NR2C2P49116 596 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 GNG11P61952 73 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 PPIDQ08752 370 aaKnown RBP12.16□□□□□ -0.46
LSM2-208ENST00000375661 SLC10A7Q0GE19 358 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 MTM1Q13496 603 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 PDK1Q15118 436 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 TBR1Q16650 682 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 CLPPQ16740 277 aaPredicted RBP12.16□□□□□ -0.46
LSM2-208ENST00000375661 COLEC12Q5KU26 742 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 CERCAMQ5T4B2 595 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 ATXN7L2Q5T6C5 722 aaPredicted RBP12.16□□□□□ -0.46
LSM2-208ENST00000375661 TMEM164Q5U3C3 297 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 B4GALNT4Q76KP1 1039 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 WDR92Q96MX6 357 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 ZNF599Q96NL3 588 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 WRAP53Q9BUR4 548 aaKnown RBP12.16□□□□□ -0.46
LSM2-208ENST00000375661 SLC25A18Q9H1K4 315 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 AKAP7Q9P0M2 348 aaPredicted RBP12.16□□□□□ -0.46
LSM2-208ENST00000375661 SEPT3Q9UH03 358 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
LSM2-208ENST00000375661 SDK2Q58EX2 2172 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 MATN3O15232 486 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 NUDT21O43809 227 aaKnown RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 TJP3O95049 919 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 ITIH1P19827 911 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 KELP23276 732 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 MSNP26038 577 aaKnown RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 CXCR5P32302 372 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 RGRP47804 291 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 KIAA1024LP59773 190 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 RHOAP61586 193 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 NFKB2Q00653 900 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 OTUD4Q01804 1114 aaKnown RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 SRSF6Q13247 344 aaKnown RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 INPP5AQ14642 412 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 LBRQ14739 615 aaKnown RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 NOMO1Q15155 1222 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 C14orf28Q4W4Y0 310 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 LRRC73Q5JTD7 316 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 FAM182AQ5T1J6 154 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 SEL1L2Q5TEA6 688 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 ERAP2Q6P179 960 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 RD3Q7Z3Z2 195 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 SPRED1Q7Z699 444 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 SLC13A5Q86YT5 568 aaPredicted RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 SLITRK4Q8IW52 837 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 PGBD5Q8N414 524 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 TEX26Q8N6G2 289 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 ACTL9Q8TC94 416 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 MAML1Q92585 1016 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 P3H4Q92791 437 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 USP7Q93009 1102 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 FATE1Q969F0 183 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 LHX3Q9UBR4 397 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
LSM2-208ENST00000375661 PTPN13Q12923 2485 aa12.15□□□□□ -0.46
LSM2-208ENST00000375661 CACNB4O00305 520 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 TNFRSF10CO14798 259 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 PPP1R12AO14974 1030 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 INSIG1O15503 277 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 ZW10O43264 779 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 CEP104O60308 925 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 ITIH2P19823 946 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 ARHGEF7Q14155 803 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 HLTFQ14527 1009 aaKnown RBP eCLIP12.14□□□□□ -0.47
LSM2-208ENST00000375661 PRKD1Q15139 912 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 UGP2Q16851 508 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 CCDC181Q5TID7 509 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 TIGD7Q6NT04 549 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 BRAT1Q6PJG6 821 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 BZW1Q7L1Q6 419 aaKnown RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 TAF8Q7Z7C8 310 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 VASH2Q86V25 355 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 ZC3H18Q86VM9 953 aaKnown RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 ZFAND4Q86XD8 727 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 RASGEF1CQ8N431 466 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 Q8N9G6 341 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 TSEN2Q8NCE0 465 aaKnown RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 CCNYQ8ND76 341 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 OR56A4Q8NGH8 313 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 TRIM44Q96DX7 344 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 PBKQ96KB5 322 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 EXOC2Q96KP1 924 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms