RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PLA2G4CQ9UP65 541 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 ATP11BQ9Y2G3 1177 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 FAM32AQ9Y421 112 aaKnown RBP8.2□□□□□ -1.1
UBR4-202ENST00000375224 ARL5AQ9Y689 179 aa8.2□□□□□ -1.1
UBR4-202ENST00000375224 H0Y626 953 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 AURKAO14965 403 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 CLTBP09497 229 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 GNAZP19086 355 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 FDXRP22570 491 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 SMAD3P84022 425 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 TYSND1Q2T9J0 566 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ZNF789Q5FWF6 425 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 VWA5B1Q5TIE3 1220 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 GLT6D1Q7Z4J2 308 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 NAT14Q8WUY8 206 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 NCSTNQ92542 709 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ASB2Q96Q27 587 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 RTKNQ9BST9 563 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 THTPAQ9BU02 230 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 TDRD1Q9BXT4 1180 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 RNF38Q9H0F5 515 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ZDHHC2Q9UIJ5 367 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 KCTD3Q9Y597 815 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 INSL5Q9Y5Q6 135 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 MAGEB3O15480 346 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 TSPAN3O60637 253 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ENTPD5O75356 428 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 WISP3O95389 354 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 C1RP00736 705 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 COX4I1P13073 169 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 LPOP22079 712 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 CCR3P51677 355 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 SUOXP51687 545 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 STC1P52823 247 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 NAA20P61599 178 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 KLF10Q13118 480 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 RNF135Q8IUD6 432 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ULK2Q8IYT8 1036 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 CPSF7Q8N684 471 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 TXNDC5Q8NBS9 432 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 TMA16Q96EY4 203 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 C2orf49Q9BVC5 232 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 MARCH4Q9P2E8 410 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 NKX1-2Q9UD57 310 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 RAI2Q9Y5P3 530 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ANAPC1Q9H1A4 1944 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 DNAH12Q6ZR08 3092 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 C2orf78A6NCI8 922 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 E9PBE3 544 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 GRID2O43424 1007 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 DCXO43602 365 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 KLHL41O60662 606 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 TBL1XO60907 577 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 PSMG1O95456 288 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 F11P03951 625 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 IMPDH1P20839 514 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 ZNF140P52738 457 aaPredicted RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 SUZ12Q15022 739 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 GSTA3Q16772 222 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 CXorf57Q6NSI4 855 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 C16orf59Q7L2K0 433 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 LSMEM2Q8N112 164 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 OR52K2Q8NGK3 314 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 AARSD1Q9BTE6 412 aaKnown RBP8.19□□□□□ -1.1
UBR4-202ENST00000375224 NDE1Q9NXR1 346 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 CRYL1Q9Y2S2 319 aa8.19□□□□□ -1.1
UBR4-202ENST00000375224 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 RGSL1A5PLK6 1076 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 A8MT66 165 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 TTC34A8MYJ7 566 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 NDUFS3O75489 264 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 GM2AP17900 193 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 CPOXP36551 454 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 NFKB2Q00653 900 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 HERC3Q15034 1050 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 LSM12Q3MHD2 195 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 KCTD21Q4G0X4 260 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 KHDC1Q4VXA5 237 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 AARS2Q5JTZ9 985 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 SPATA6LQ8N4H0 392 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 CARNMT1Q8N4J0 409 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 OR13C4Q8NGS5 318 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 RP9Q8TA86 221 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 RHEBL1Q8TAI7 183 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 AGR3Q8TD06 166 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 MAPK15Q8TD08 544 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 MRPS31Q92665 395 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 PRPF18Q99633 342 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 RC3H2Q9HBD1 1191 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 NMRK1Q9NWW6 199 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 TAS2R13Q9NYV9 303 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 GTSE1Q9NYZ3 720 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 ANGPTL2Q9UKU9 493 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 COMMD10Q9Y6G5 202 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 OR51F1A6NGY5 319 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 ANKRD66B4E2M5 251 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms