RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 TRPV3Q8NET8 790 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 ZNF419Q96HQ0 510 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-203ENST00000374877 FEM1CQ96JP0 617 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 SEPHS2Q99611 448 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 GLOD4Q9HC38 313 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 CD320Q9NPF0 282 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 IPPQ9Y573 584 aa11.07□□□□□ -0.64
CCDC40-203ENST00000374877 PPP6CO00743 305 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ACOX3O15254 700 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SERPINB7O75635 380 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SLC4A1P02730 911 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CCNA2P20248 432 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 KCNC1P48547 511 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 NFATC3Q12968 1075 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 GRB7Q14451 532 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ZIK1Q3SY52 487 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SV2CQ496J9 727 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 IRAK1BP1Q5VVH5 260 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TWF2Q6IBS0 349 aaKnown RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 LCN8Q6JVE9 175 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 PRMT9Q6P2P2 845 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 GALNT18Q6P9A2 607 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SMG8Q8ND04 991 aaKnown RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TANKQ92844 425 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ACDQ96AP0 544 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TUBGCP3Q96CW5 907 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 DOK1Q99704 481 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 RNF208Q9H0X6 261 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 PIF1Q9H611 641 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 GDAP2Q9NXN4 497 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 IFT80Q9P2H3 777 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 FXYD1O00168 92 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CCL22O00626 93 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SNAP91O60641 907 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CLASP2O75122 1294 aaKnown RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 GFAPP14136 432 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 IMPDH1P20839 514 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SLC6A2P23975 617 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TNK2Q07912 1038 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ITGADQ13349 1161 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 MOGQ16653 247 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CYBRD1Q53TN4 286 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 RABL3Q5HYI8 236 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 HECTD2Q5U5R9 776 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 MRPL10Q7Z7H8 261 aaKnown RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SLC15A4Q8N697 577 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 BPIFB6Q8NFQ5 453 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 OR52K2Q8NGK3 314 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 KCTD13Q8WZ19 329 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 LRRC58Q96CX6 371 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 FANCEQ9HB96 536 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 MID1IP1Q9NPA3 183 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 GID8Q9NWU2 228 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ABCD2Q9UBJ2 740 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CORINQ9Y5Q5 1042 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 DNAJC15Q9Y5T4 150 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TRIM43BA6NCK2 446 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 PIP5K1BO14986 540 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ZNF623O75123 536 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SIX3O95343 332 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 BCL10O95999 233 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CKBP12277 381 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 HSD17B1P14061 328 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 MATN1P21941 496 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 PNPLA4P41247 253 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ATP4BP51164 291 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 GEMP55040 296 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 LILRA4P59901 499 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ACAP2Q15057 778 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 ZNF678Q5SXM1 525 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 EGFLAMQ63HQ2 1017 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 KIAA0930Q6ICG6 404 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 SPRED1Q7Z699 444 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 PIM3Q86V86 326 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 FAM126BQ8IXS8 530 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CLYBLQ8N0X4 340 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 OR6P1Q8NGX9 317 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 FCRL5Q96RD9 977 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TREX1Q9NSU2 369 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 RBM22Q9NW64 420 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC40-203ENST00000374877 CACNG4Q9UBN1 327 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 PADI3Q9ULW8 664 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 BTRCQ9Y297 605 aa11.06□□□□□ -0.64
CCDC40-203ENST00000374877 TRIM64A6NGJ6 449 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CFAP99D6REC4 459 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 KCNH1O95259 989 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 FCGR1AP12314 374 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CDH3P22223 829 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 BDNFP23560 247 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ELK4P28324 431 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 RXRGP48443 463 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 SH3BP2P78314 561 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 BFSP2Q13515 415 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 NFYCQ13952 458 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 LDLRAP1Q5SW96 308 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms