RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 EPHA3P29320 983 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 HOXA9P31269 272 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 CSKP41240 450 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 TNK2Q07912 1038 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 USP10Q14694 798 aaKnown RBP13.25□□□□□ -0.29
A1CF-204ENST00000373997 SH2D4BQ5SQS7 431 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 PPHLN1Q8NEY8 458 aaKnown RBP13.25□□□□□ -0.29
A1CF-204ENST00000373997 RIN3Q8TB24 985 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 AGR3Q8TD06 166 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 RCN3Q96D15 328 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 NKX2-4Q9H2Z4 354 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 MRPL40Q9NQ50 206 aaKnown RBP13.25□□□□□ -0.29
A1CF-204ENST00000373997 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 ZNF510Q9Y2H8 683 aa13.25□□□□□ -0.29
A1CF-204ENST00000373997 TARM1B6A8C7 271 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 TK2O00142 265 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PDLIM1O00151 329 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 GFRA2O00451 464 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 NPHS1O60500 1241 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
A1CF-204ENST00000373997 SBK3P0C264 359 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 XRCC1P18887 633 aaPredicted RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 PMLP29590 882 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 ABCG1P45844 678 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 RGRP47804 291 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 NAGLUP54802 743 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 ARF5P84085 180 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 ART3Q13508 389 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PCID2Q5JVF3 399 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 RANBP10Q6VN20 620 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 CNTN4Q8IWV2 1026 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 ACVR1CQ8NER5 493 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 SCYL1Q96KG9 808 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 NDNQ99608 321 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 MRPS26Q9BYN8 205 aaKnown RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 NUF2Q9BZD4 464 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 ZNF696Q9H7X3 374 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 UTP6Q9NYH9 597 aaKnown RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 CNOT11Q9UKZ1 510 aaKnown RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 BPTFQ12830 3046 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 PRSS51A0A1B0GVH4 220 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 TRPC5OSA6NMA1 111 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 GOLGA8TH3BQL2 631 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 TNFAIP8O95379 198 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 CRTAMO95727 393 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 SLC35E2BP0CK96 405 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 CEBPBP17676 345 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PFKLP17858 780 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 DDX6P26196 483 aaKnown RBP eCLIP13.24□□□□□ -0.29
A1CF-204ENST00000373997 MRPS22P82650 360 aaKnown RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 CEACAM7Q14002 265 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 LRRC8EQ6NSJ5 796 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 RTL10Q7L3V2 364 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 SATL1Q86VE3 508 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 CPXM2Q8N436 756 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 C12orf76Q8N812 135 aaPredicted RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 MGME1Q9BQP7 344 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PBX4Q9BYU1 374 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 PTTG2Q9NZH5 202 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 ZDHHC2Q9UIJ5 367 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 RUVBL2Q9Y230 463 aaKnown RBP13.24□□□□□ -0.29
A1CF-204ENST00000373997 ACOT9Q9Y305 439 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 TCAF1Q9Y4C2 921 aa13.24□□□□□ -0.29
A1CF-204ENST00000373997 TMCC1O94876 653 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 CLPTM1O96005 669 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 NRIP1P48552 1158 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 SCNN1BP51168 640 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 KPNA2P52292 529 aaKnown RBP13.23□□□□□ -0.29
A1CF-204ENST00000373997 CREB5Q02930 508 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 GALNT3Q14435 633 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 MPPE1Q53F39 396 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 SIRPB2Q5JXA9 342 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 PRSS36Q5K4E3 855 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 PDE12Q6L8Q7 609 aaKnown RBP13.23□□□□□ -0.29
A1CF-204ENST00000373997 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 ZNF783Q6ZMS7 281 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 CCDC117Q8IWD4 279 aaPredicted RBP13.23□□□□□ -0.29
A1CF-204ENST00000373997 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 FSTL5Q8N475 847 aaPredicted RBP13.23□□□□□ -0.29
A1CF-204ENST00000373997 MAELQ96JY0 434 aaKnown RBP13.23□□□□□ -0.29
A1CF-204ENST00000373997 CATSPER2Q96P56 530 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 FEM1AQ9BSK4 669 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 HACD3Q9P035 362 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 CLEC4EQ9ULY5 219 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
A1CF-204ENST00000373997 H0YJX3 145 aa13.22□□□□□ -0.29
A1CF-204ENST00000373997 PHGDHO43175 533 aaKnown RBP13.22□□□□□ -0.29
A1CF-204ENST00000373997 SERPINF2P08697 491 aa13.22□□□□□ -0.29
A1CF-204ENST00000373997 ENO3P13929 434 aaPredicted RBP13.22□□□□□ -0.29
A1CF-204ENST00000373997 PSMD8P48556 350 aa13.22□□□□□ -0.29
A1CF-204ENST00000373997 SERPINH1P50454 418 aaKnown RBP13.22□□□□□ -0.29
A1CF-204ENST00000373997 RAB10P61026 200 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms