RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 H0YJX3 145 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PRMT5O14744 637 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 HGSO14964 777 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 UBDO15205 165 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 TEX28O15482 410 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 MAP3K7O43318 606 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DCXO43602 365 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DNAJA2O60884 412 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 TBL1XO60907 577 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 XYLBO75191 536 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 LYPLA1O75608 230 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 RHOBTB1O94844 696 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PGLSO95336 258 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 GJB5O95377 273 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 MATN4O95460 622 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PRLP01236 227 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ENO2P09104 434 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 IDO1P14902 403 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 RAG1P15918 1043 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF30P17039 623 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ITGALP20701 1170 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ATP6V1C1P21283 382 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 SAT1P21673 171 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DGKAP23743 735 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 RPS24P62847 133 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 MRPS35P82673 323 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 MAD2L1Q13257 205 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 KPNB1Q14974 876 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 LSM12Q3MHD2 195 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 C1orf146Q5VVC0 180 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 CES4AQ5XG92 561 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 OGFOD2Q6N063 350 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PSRC1Q6PGN9 363 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.68□□□□□ -1.023e-7■■■■■ 29.2
SNRNP40-202ENST00000373720 SNX20Q7Z614 316 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DEFB128Q7Z7B8 93 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 CUZD1Q86UP6 607 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 TMEM173Q86WV6 379 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 MYLK4Q86YV6 388 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 LSMEM2Q8N112 164 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PELI3Q8N2H9 469 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 TCAIMQ8N3R3 496 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 CCNYL1Q8N7R7 359 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 OR7D4Q8NG98 312 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 OR4K2Q8NGD2 314 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DNAJB8Q8NHS0 232 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 TIFAQ96CG3 184 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ALG14Q96F25 216 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DNAJC1Q96KC8 554 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PLEKHG4BQ96PX9 1271 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 PANX3Q96QZ0 392 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 NR1H4Q96RI1 486 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 VN1R3Q9BXE9 311 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 RNF38Q9H0F5 515 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 YY1AP1Q9H869 796 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 RDH14Q9HBH5 336 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 RIC8BQ9NVN3 520 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 NUDT4Q9NZJ9 180 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 IL17CQ9P0M4 197 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ARMCX1Q9P291 453 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 SLC17A6Q9P2U8 582 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 NFKBIL1Q9UBC1 381 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 SLC7A8Q9UHI5 535 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 ZDHHC2Q9UIJ5 367 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 GNPTGQ9UJJ9 305 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 LRCH1Q9Y2L9 728 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 NDUFAF1Q9Y375 327 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 DHRS7Q9Y394 339 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 KIAA1671Q9BY89 1806 aa8.68□□□□□ -1.02
SNRNP40-202ENST00000373720 A0A088AWK7 358 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 C15orf38-AP3S2A0A0A6YYH1 394 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 WASH3PC4AMC7 463 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 E5RI56 91 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 GOLGA8TH3BQL2 631 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 MUSKO15146 869 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 NVLO15381 856 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 ADAM12O43184 909 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 GREM1O60565 184 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 SNX2O60749 519 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 FGF18O76093 207 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 SUPT7LO94864 414 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 UPP2O95045 317 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 PAPLNO95428 1278 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 POP4O95707 220 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 S100BP04271 92 aaPredicted RBP8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 GSTM1P09488 218 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 UROSP10746 265 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 PTPN2P17706 415 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 ME2P23368 584 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 PIK3R1P27986 724 aa8.67□□□□□ -1.02
SNRNP40-202ENST00000373720 NNMTP40261 264 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms