RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 SLC25A51Q9H1U9 297 aa21.58■■□□□ 1.05
CCDC28B-201ENST00000373602 PKD2L2Q9NZM6 624 aa21.58■■□□□ 1.05
CCDC28B-201ENST00000373602 SEPT10Q9P0V9 454 aa21.58■■□□□ 1.05
CCDC28B-201ENST00000373602 ITPR1Q14643 2758 aa21.58■■□□□ 1.04
CCDC28B-201ENST00000373602 RGSL1A5PLK6 1076 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 CDRT15L2A8MXV6 281 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 INHBCP55103 352 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 MAZP56270 477 aaKnown RBP21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 B4GALNT1Q00973 533 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 PEX6Q13608 980 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 GALNT3Q14435 633 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 SLC14A2Q15849 920 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 PYCR3Q53H96 274 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 TEX44Q53QW1 395 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 HENMT1Q5T8I9 393 aaKnown RBP21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 FOXR1Q6PIV2 292 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 BZW1Q7L1Q6 419 aaKnown RBP21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 ZNF438Q7Z4V0 828 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 ARL14Q8N4G2 192 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 CCHCR1Q8TD31 782 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 NAF1Q96HR8 494 aaKnown RBP21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 FOXP3Q9BZS1 431 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 STRADBQ9C0K7 418 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 GOLPH3Q9H4A6 298 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 EPB41L5Q9HCM4 733 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 CNOT6Q9ULM6 557 aaKnown RBP21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 PLEKHM1Q9Y4G2 1056 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 PCDHA13Q9Y5I0 950 aa21.57■■□□□ 1.04
CCDC28B-201ENST00000373602 PTPRQQ9UMZ3 2332 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 A0A0A6YYK5 440 aaPredicted RBP21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 INPP4BO15327 924 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 CST8O60676 142 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 ECEL1O95672 775 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 NR1D2Q14995 579 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 PRKD1Q15139 912 aaPredicted RBP21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 SPOCD1Q6ZMY3 1216 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 B4GALNT4Q76KP1 1039 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 MARK2Q7KZI7 788 aaKnown RBP21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 CLEC14AQ86T13 490 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 NAGSQ8N159 534 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 KCNE4Q8WWG9 221 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 FAM83DQ9H4H8 585 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 VPS18Q9P253 973 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 SAE1Q9UBE0 346 aaPredicted RBP21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 ATXN7L1Q9ULK2 861 aaPredicted RBP21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 UNC13CQ8NB66 2214 aa21.56■■□□□ 1.04
CCDC28B-201ENST00000373602 PLD2O14939 933 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 B4GAT1O43505 415 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 TNFSF15O95150 251 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 ITGA2BP08514 1039 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 PTPN3P26045 913 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 CYLC1P35663 651 aaPredicted RBP21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 ACTR1BP42025 376 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 ACTR1AP61163 376 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 CDK18Q07002 472 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 ZFP36L1Q07352 338 aaKnown RBP21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 SPA17Q15506 151 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 RAB11FIP2Q7L804 512 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 LYSMD3Q7Z3D4 306 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 GALNT13Q8IUC8 556 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 KATNAL2Q8IYT4 538 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 FBXO39Q8N4B4 442 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 EID2BQ96D98 161 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 TEKT5Q96M29 485 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 FCRL3Q96P31 734 aaPredicted RBP21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 DPH1Q9BZG8 443 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 ZFYVE1Q9HBF4 777 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 GLOD4Q9HC38 313 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 MAGEE1Q9HCI5 957 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 TFR2Q9UP52 801 aa21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 OAS3Q9Y6K5 1087 aaKnown RBP21.55■■□□□ 1.04
CCDC28B-201ENST00000373602 RHPN2P1A8MT19 583 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 FADS2P1A8MWK0 482 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 DNAJC6O75061 913 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 ASMTLO95671 621 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 PECAM1P16284 738 aaPredicted RBP21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 UGT1A5P35504 534 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 ZNF75DP51815 510 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 ADCY2Q08462 1091 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 LRP8Q14114 963 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 LLGL1Q15334 1064 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 KAZNQ674X7 775 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 C11orf63Q6NUN7 778 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 KDELC2Q7Z4H8 507 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 RCOR2Q8IZ40 523 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 SPATA22Q8NHS9 363 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 TFB1MQ8WVM0 346 aaKnown RBP21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 PATE1Q8WXA2 126 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 MRFAP1L1Q96HT8 127 aa21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 BBC3Q96PG8 261 aaPredicted RBP21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 LUC7LQ9NQ29 371 aaKnown RBP21.54■■□□□ 1.04
CCDC28B-201ENST00000373602 hCG_1818297A0A087WSY0 165 aa21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 ZRANB2O95218 330 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 MT-CYBP00156 380 aaPredicted RBP21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 ATP1A1P05023 1023 aaKnown RBP21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 MARCKSL1P49006 195 aa21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 OR1D5P58170 312 aa21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 PCSK7Q16549 785 aa21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 TFDP3Q5H9I0 405 aa21.53■■□□□ 1.04
CCDC28B-201ENST00000373602 TMPRSS9Q7Z410 1059 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms