RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SPATA5L1Q9BVQ7 753 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 MAF1Q9H063 256 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 MUC13Q9H3R2 512 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 NOL11Q9H8H0 719 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 DMAC2Q9NW81 257 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 FETUBQ9UGM5 382 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 VPS51Q9UID3 782 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 POLR3HQ9Y535 204 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 ATP6AP2A0A1C7CYW4 349 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 PLK4O00444 970 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 PAGE1O75459 146 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 ATP6AP2O75787 350 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 SDC2P34741 201 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 EFR3AQ14156 821 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 SKIV2LQ15477 1246 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 PABPC1LQ4VXU2 614 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 ZC3H7AQ8IWR0 971 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 PGAM4Q8N0Y7 254 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 NAT14Q8WUY8 206 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 CCDC115Q96NT0 180 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 MRPL17Q9NRX2 175 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 FAM240BA0A1B0GVZ2 78 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 SLC15A5A6NIM6 579 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 IPO13O94829 963 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 SGCGQ13326 291 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 NPY5RQ15761 445 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 APTXQ7Z2E3 356 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 UGT2B11O75310 529 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 PSIP1O75475 530 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 TIPRLO75663 272 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 MC4RP32245 332 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 VBP1P61758 197 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 HSPA14Q0VDF9 509 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 OR2T34Q8NGX1 318 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 OR2T3Q8NH03 318 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
LMX1B-202ENST00000373474 FCRL2Q96LA5 508 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 DENND2DQ9H6A0 471 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 STOX2Q9P2F5 926 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 PARP4Q9UKK3 1724 aaKnown RBP14.18□□□□□ -0.14
LMX1B-202ENST00000373474 SIGLEC1Q9BZZ2 1709 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 IGKV6D-41A0A0C4DH26 115 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 NPEPPSL1A6NEC2 478 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 METTL21CQ5VZV1 264 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 TPGS1Q6ZTW0 290 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 FRMD7Q6ZUT3 714 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 METTL3Q86U44 580 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 OR8H1Q8NGG4 311 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 C12orf65Q9H3J6 166 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 AGO1Q9UL18 857 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 IRF6O14896 467 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 AP2A1O95782 977 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 AMHP03971 560 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 CD48P09326 243 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 ITGA3P26006 1051 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 TAF13Q15543 124 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 FNDC3BQ53EP0 1204 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 REP15Q6BDI9 236 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 DSG4Q86SJ6 1040 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 PCDH12Q9NPG4 1184 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 SLC35C2Q9NQQ7 365 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 SLIT2O94813 1529 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 A0A0G2JPF8 293 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 HNRNPCL3B7ZW38 293 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 RPP40O75818 363 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 FTH1P02794 183 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 HNRNPCL4P0DMR1 293 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 LIN52Q52LA3 116 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 DOK6Q6PKX4 331 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 ZNF655Q8N720 491 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 CNTD1Q8N815 330 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 BANPQ8N9N5 519 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 CLHC1Q8NHS4 586 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 THG1LQ9NWX6 298 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 MAFBQ9Y5Q3 323 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 CNTNAP1P78357 1384 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 NR2F6P10588 404 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 ACADMP11310 421 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 ADRA1BP35368 520 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 LIMK2P53671 638 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 NOMO2Q5JPE7 1267 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 PPM1LQ5SGD2 360 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 FAM129BQ96TA1 746 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 MED28Q9H204 178 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 MGAT4AQ9UM21 535 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 MOXD2PA6NHM9 499 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 TSPAN4O14817 238 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 UGT2B15P54855 530 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 RPTNQ6XPR3 784 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 OTOP3Q7RTS5 596 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 SAPCD2Q86UD0 394 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 TRAPPC5Q8IUR0 188 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 HTRA1Q92743 480 aa14.17□□□□□ -0.14
LMX1B-202ENST00000373474 NXF3Q9H4D5 531 aaKnown RBP14.17□□□□□ -0.14
LMX1B-202ENST00000373474 MCUBQ9NWR8 336 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms