RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TEX28O15482 410 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TIPRLO75663 272 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 KCNH1O95259 989 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ITGAVP06756 1048 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 LILRA4P59901 499 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 RAB30Q15771 203 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PARP15Q460N3 678 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF544Q6NX49 715 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 GALNT18Q6P9A2 607 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 AADATQ8N5Z0 425 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 STARD8Q92502 1023 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 CEP295NLQ96MC4 621 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 NUAK2Q9H093 628 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PLK2Q9NYY3 685 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 CHKBQ9Y259 395 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 INVSQ9Y283 1065 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 MRPS17Q9Y2R5 130 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TNPO3Q9Y5L0 923 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 NID2Q14112 1375 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 GMFGO60234 142 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 RECQL5O94762 991 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ANXA5P08758 320 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TSPAN19P0C672 248 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 LBPP18428 481 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 CCNA2P20248 432 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 XYLT1Q86Y38 959 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ATL1Q8WXF7 558 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 GAL3ST3Q96A11 431 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 MYO19Q96H55 970 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 HGH1Q9BTY7 390 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 KLHL28Q9NXS3 571 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TMCO1Q9UM00 188 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 STXBP5LQ9Y2K9 1186 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 hCG_1818297A0A087WSY0 165 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ABHD14A-ACY1A0A1B0GW23 586 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 LPOP22079 712 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 RIPK1Q13546 671 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 C5orf22Q49AR2 442 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 LACTB2Q53H82 288 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 MZT2BQ6NZ67 158 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ABCG2Q9UNQ0 655 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 INSL6Q9Y581 213 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 IL6P05231 212 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 HNRNPH3P31942 346 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 GUCA1AP43080 201 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 CDK18Q07002 472 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 KREMEN1Q96MU8 473 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 REEP1Q9H902 201 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 CAB39LQ9H9S4 337 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 RNF186Q9NXI6 227 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 C8AP07357 584 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 TACR2P21452 398 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 GRIA3P42263 894 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 BST1Q10588 318 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 ATG14Q6ZNE5 492 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC51AQ86UW1 340 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 CENPIQ92674 756 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 PCED1BQ96HM7 432 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 LGMNQ99538 433 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 MYOCQ99972 504 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 TRPV5Q9NQA5 729 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 STOX2Q9P2F5 926 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 PRPF19Q9UMS4 504 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 DUOX1Q9NRD9 1551 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 AHDC1Q5TGY3 1603 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 DHX15O43143 795 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 C1RP00736 705 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 KELP23276 732 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 CXCR2P25025 360 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 ARF5P84085 180 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 AKAP14Q86UN6 197 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 ART5Q96L15 291 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 QRFPRQ96P65 431 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 MARCH7Q9H992 704 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 FBXO6Q9NRD1 293 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 AGRPO00253 132 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 RFC2P35250 354 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 PSMD8P48556 350 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 UBAP2LQ14157 1087 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 CDK20Q8IZL9 346 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 SFRP1Q8N474 314 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 JOSD2Q8TAC2 188 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 UBE2E3Q969T4 207 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 PNPP00491 289 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 ENO2P09104 434 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 BNIP2Q12982 314 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZCCHC8Q6NZY4 707 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 ULK3Q6PHR2 472 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 CACTIN-AS1Q8N1I8 211 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms