RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MIB1Q86YT6 1006 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ALLCQ8N6M5 410 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 DNAJB4Q9UDY4 337 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 LOC100509620A0A075B734 347 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PER2O15055 1255 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 AKAP3O75969 853 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PPP3R1P63098 170 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 OXCT2Q9BYC2 517 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 RGCCQ9H4X1 137 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 C12orf71A8MTZ7 269 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CRYZL1O95825 349 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CYP11B2P19099 503 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CLCN5P51795 746 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PTGR2Q8N8N7 351 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 SEMA3GQ9NS98 782 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PDCD5O14737 125 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ACOX3O15254 700 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PCDHGA12O60330 932 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 HTR2AP28223 471 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PRDX6P30041 224 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 OR1E1P30953 314 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 VAMP2P63027 116 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 RFTN2Q52LD8 501 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 NT5DC1Q5TFE4 455 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 LRRN1Q6UXK5 716 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CPSF7Q8N684 471 aaKnown RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF366Q8N895 744 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 KCTD7Q96MP8 289 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 COMMD4Q9H0A8 199 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF700Q9H0M5 742 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 MTMR4Q9NYA4 1195 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 MALT1Q9UDY8 824 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 TLL2Q9Y6L7 1015 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 GSCP56915 257 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PTPAQ15257 358 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 IPCEF1Q8WWN9 437 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 POP1Q99575 1024 aaKnown RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 NFKBIZQ9BYH8 718 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PRDM16Q9HAZ2 1276 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 GULP1Q9UBP9 304 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 SEC14L3Q9UDX4 400 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PLLPQ9Y342 182 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 RIIAD1A6NNX1 92 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 AURKAO14965 403 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 TSPAN1O60635 241 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 KCNA6P17658 529 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PRKACBP22694 351 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CDH13P55290 713 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PSTKQ8IV42 348 aaKnown RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 OR4C6Q8NH72 309 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 TCEAL4Q96EI5 215 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 KCTD15Q96SI1 283 aaPredicted RBP15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CHST7Q9NS84 486 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ATP6AP2A0A1C7CYW4 349 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ELOVL7A1L3X0 281 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ATP6AP2O75787 350 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CXCR2P25025 360 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 TMEM132BQ14DG7 1078 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 UNC5AQ6ZN44 842 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 CENPSQ8N2Z9 138 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 SLC30A2Q9BRI3 323 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 HIF3AQ9Y2N7 669 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 KCNE2Q9Y6J6 123 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 TRPM1Q7Z4N2 1603 aa15.22■□□□□ 0.03
COL5A1-201ENST00000371817 ARL5CA6NH57 179 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 ENDOD1O94919 500 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 CYP2U1Q7Z449 544 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TRABD2AQ86V40 505 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 LZTR1Q8N653 840 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TNFRSF25Q93038 417 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 ACSS3Q9H6R3 686 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 EXO5Q9H790 373 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TRAF6Q9Y4K3 522 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 AZIN1O14977 448 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TSPAN3O60637 253 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 UPP2O95045 317 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 PAPSS2O95340 614 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-201ENST00000371817 LINGO3P0C6S8 592 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TFEBP19484 476 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 GLDCP23378 1020 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 FBXO43Q4G163 708 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 ABCA11PQ4W5N1 156 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TCTEX1D2Q8WW35 142 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 NKD1Q969G9 470 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 RHBDF1Q96CC6 855 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 DCSTAMPQ9H295 470 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 DNAJC28Q9NX36 388 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 PCDHGC3Q9UN70 934 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 EVPLQ92817 2033 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 A0A0A0MRY4 1105 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 H7C1W4 665 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 HNRNPLP14866 589 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL5A1-201ENST00000371817 OR1G1P47890 313 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 TTPAP49638 278 aa15.21■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF135P52742 658 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-201ENST00000371817 ANGEL2Q5VTE6 544 aaKnown RBP15.21■□□□□ 0.03
COL5A1-201ENST00000371817 SPATA13Q96N96 652 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms