RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TWIST2Q8WVJ9 160 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 COPS7BQ9H9Q2 264 aaPredicted RBP28.82■■■□□ 2.2
SSBP3-204ENST00000371320 SUCOQ9UBS9 1254 aaKnown RBP28.82■■■□□ 2.2
SSBP3-204ENST00000371320 CAPN8A6NHC0 703 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 EFEMP2O95967 443 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 ALDOCP09972 364 aaKnown RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 CDKN1CP49918 316 aaPredicted RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 RPL26P61254 145 aaKnown RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 PTPRNQ16849 979 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 FAM43BQ6ZT52 329 aaPredicted RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 REM2Q8IYK8 340 aaPredicted RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 GPR21Q99679 349 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 VN1R3Q9BXE9 311 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 VPS9D1Q9Y2B5 631 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 EEF1DP29692 281 aaKnown RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 TRIM25Q14258 630 aaKnown RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 CXorf57Q6NSI4 855 aaKnown RBP28.81■■■□□ 2.2
SSBP3-204ENST00000371320 WBP2Q969T9 261 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 KLHL32Q96NJ5 620 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 CLSTN3Q9BQT9 956 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 SPAG4Q9NPE6 437 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 RIMS3Q9UJD0 308 aa28.81■■■□□ 2.2
SSBP3-204ENST00000371320 ANKRD66B4E2M5 251 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 PIP5K1BO14986 540 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 GNRH1P01148 92 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 PYGLP06737 847 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 FOXA1P55317 472 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 TSNQ15631 228 aaKnown RBP28.8■■■□□ 2.2
SSBP3-204ENST00000371320 KIF19Q2TAC6 998 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 RNF220Q5VTB9 566 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 KANK2Q63ZY3 851 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 EFHBQ8N7U6 833 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 DCUN1D1Q96GG9 259 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 KLF16Q9BXK1 252 aaPredicted RBP28.8■■■□□ 2.2
SSBP3-204ENST00000371320 FKBPLQ9UIM3 349 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 IKZF3Q9UKT9 509 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 PTGDR2Q9Y5Y4 395 aa28.8■■■□□ 2.2
SSBP3-204ENST00000371320 OAS3Q9Y6K5 1087 aaKnown RBP28.8■■■□□ 2.2
SSBP3-204ENST00000371320 C2orf78A6NCI8 922 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 TXNDC9O14530 226 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PFDN6O15212 129 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PQBP1O60828 265 aaKnown RBP28.79■■■□□ 2.2
SSBP3-204ENST00000371320 ECI2O75521 394 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 GPX3P22352 226 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 MC4RP32245 332 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 ARF5P84085 180 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 CLCQ05315 142 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PLD1Q13393 1074 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 LINGO4Q6UY18 593 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 DDIASQ8IXT1 998 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 NKAPQ8N5F7 415 aaKnown RBP28.79■■■□□ 2.2
SSBP3-204ENST00000371320 MYRFLQ96LU7 910 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 BIRC8Q96P09 236 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 GCNAQ96QF7 691 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 CFHR5Q9BXR6 569 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 CROTQ9UKG9 612 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PRSS51A0A1B0GVH4 220 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 SYCE1LA8MT33 242 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 TRIM24O15164 1050 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 TMCC1O94876 653 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 C1RP00736 705 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 FOLH1Q04609 750 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 LCP2Q13094 533 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PSAPL1Q6NUJ1 521 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 LAYNQ6UX15 382 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PIANPQ8IYJ0 282 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 PHC3Q8NDX5 983 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 ZNF461Q8TAF7 563 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 IGSF21Q96ID5 467 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 KCNA7Q96RP8 456 aa28.79■■■□□ 2.2
SSBP3-204ENST00000371320 CDC7O00311 574 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 STX7O15400 261 aaKnown RBP28.78■■■□□ 2.2
SSBP3-204ENST00000371320 SNAP91O60641 907 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 TTPAP49638 278 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 CCL23P55773 120 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 HACD2Q6Y1H2 254 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 FUNDC1Q8IVP5 155 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 LILRA2Q8N149 483 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 CATSPER1Q8NEC5 780 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 BPIFA1Q9NP55 256 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 GALPQ9UBC7 116 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 FNDC3AQ9Y2H6 1198 aaKnown RBP28.78■■■□□ 2.2
SSBP3-204ENST00000371320 ASB3Q9Y575 518 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 VPS26AO75436 327 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 PKMP14618 531 aaKnown RBP28.78■■■□□ 2.2
SSBP3-204ENST00000371320 TRAF2Q12933 501 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 ANKS6Q68DC2 871 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 TOP1MTQ969P6 601 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 PKP2Q99959 881 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 PCDHAC1Q9H158 963 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 SMPD4Q9NXE4 827 aa28.78■■■□□ 2.2
SSBP3-204ENST00000371320 NPEPPSL1A6NEC2 478 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 BTN3A1O00481 513 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 OR1I1O60431 355 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 ABLIM3O94929 683 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 CD160O95971 181 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 RALGDSQ12967 914 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 ZRANB3Q5FWF4 1079 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 HERC6Q8IVU3 1022 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 FUBP1Q96AE4 644 aaKnown RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms