RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KHNYNO15037 678 aaKnown RBP13.82□□□□□ -0.2
TPM3-211ENST00000368531 VILLO15195 856 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 TP73O15350 636 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 GPR39O43194 453 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A9O60656 530 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 SOD1P00441 154 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A6P19224 532 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A1P22309 533 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A4P22310 534 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 HOXD12P35452 270 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A3P35503 534 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A5P35504 534 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 HADHAP40939 763 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 RABIFP47224 123 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 ARSDP51689 593 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 ARL4CP56559 192 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 DCDC1P59894 354 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 PFN3P60673 137 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 DPTQ07507 201 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 DHX9Q08211 1270 aaKnown RBP13.82□□□□□ -0.2
TPM3-211ENST00000368531 LAMB3Q13751 1172 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 PDE1CQ14123 709 aaPredicted RBP13.82□□□□□ -0.2
TPM3-211ENST00000368531 HIF1AQ16665 826 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 SKIDA1Q1XH10 827 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 ZNF648Q5T619 568 aaPredicted RBP13.82□□□□□ -0.2
TPM3-211ENST00000368531 DOK6Q6PKX4 331 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 PDIK1LQ8N165 341 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 AGGF1Q8N302 714 aaeCLIP13.82□□□□□ -0.21e-7■□□□□ 11.2
TPM3-211ENST00000368531 IFT81Q8WYA0 676 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 FUBP1Q96AE4 644 aaKnown RBP13.82□□□□□ -0.2
TPM3-211ENST00000368531 CDKN2AIPNLQ96HQ2 116 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 PLEKHG4BQ96PX9 1271 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 LGR4Q9BXB1 951 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 NUSAP1Q9BXS6 441 aaKnown RBP13.82□□□□□ -0.2
TPM3-211ENST00000368531 WDR26Q9H7D7 661 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 CAAP1Q9H8G2 361 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A7Q9HAW7 530 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A10Q9HAW8 530 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 UGT1A8Q9HAW9 530 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 SLC6A14Q9UN76 642 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 ANKRD6Q9Y2G4 727 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 SNX11Q9Y5W9 270 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 CCDC162PA2VCL2 907 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 OR51F1A6NGY5 319 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SMAPO00193 183 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 CACNB4O00305 520 aaPredicted RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 SCAMP1O15126 338 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SRP72O76094 671 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 SLU7O95391 586 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 PRAMEF1O95521 474 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ASMTLO95671 621 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 MC4RP32245 332 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 MAGEA3P43357 314 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 DRG2P55039 364 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 PRAMEP78395 509 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 CDK3Q00526 305 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 BNC1Q01954 994 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 PDIA2Q13087 525 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 HLTFQ14527 1009 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPM3-211ENST00000368531 KIF19Q2TAC6 998 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ATP13A5Q4VNC0 1218 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZNF542PQ5EBM4 170 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 DNAJC21Q5F1R6 531 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZRANB3Q5FWF4 1079 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 PLA2G2CQ5R387 149 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZDHHC20Q5W0Z9 365 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SLC23A3Q6PIS1 610 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ENPP7Q6UWV6 458 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 NLRP9Q7RTR0 991 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 RABEPKQ7Z6M1 372 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 CCDC25Q86WR0 208 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SPATS2Q86XZ4 545 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 ANKMY2Q8IV38 441 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 RAVER1Q8IY67 606 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 SLC22A18ASQ8N1D0 253 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 TRAM1L1Q8N609 369 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 OR2I1PQ8NGU4 316 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 OR6P1Q8NGX9 317 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 GDAP1Q8TB36 358 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 FBXO25Q8TCJ0 367 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZNF398Q8TD17 642 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 RUBCNQ92622 972 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ART4Q93070 314 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 HDAC10Q969S8 669 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZNF669Q96BR6 464 aaPredicted RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 MFSD3Q96ES6 412 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 STAMBPL1Q96FJ0 436 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 HIC2Q96JB3 615 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SIGLEC10Q96LC7 697 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ZSCAN5AQ9BUG6 496 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 CDH19Q9H159 772 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 ASB8Q9H765 288 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 PARD6AQ9NPB6 346 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms