RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SRPK1Q96SB4 655 aaKnown RBP15□□□□□ -0.01
SMPDL3A-201ENST00000368440 TRABDQ9H4I3 376 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 PHPT1Q9NRX4 125 aaPredicted RBP15□□□□□ -0.01
SMPDL3A-201ENST00000368440 IL17CQ9P0M4 197 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 KLQ9UEF7 1012 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 APOBEC3BQ9UH17 382 aaKnown RBP15□□□□□ -0.01
SMPDL3A-201ENST00000368440 PCOLCE2Q9UKZ9 415 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 KCTD3Q9Y597 815 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 CABIN1Q9Y6J0 2220 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 PLXNB3Q9ULL4 1909 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 RGSL1A5PLK6 1076 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 KCNK5O95279 499 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 FUCA1P04066 466 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 CELA2BP08218 269 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 TPH1P17752 444 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 CSRP1P21291 193 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 TEAD1P28347 426 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 GRIA1P42261 906 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 NOVA1P51513 510 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 DCDC1P59894 354 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 SRP54P61011 504 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 HNRNPKP61978 463 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 PPARDQ03181 441 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 SUZ12Q15022 739 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 PSAPL1Q6NUJ1 521 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 CCDC137Q6PK04 289 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 MICALCLQ6ZW33 695 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 RD3Q7Z3Z2 195 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 ZNF548Q8NEK5 533 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 OR56A4Q8NGH8 313 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 OR52K1Q8NGK4 314 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 ATL2Q8NHH9 583 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 BAHD1Q8TBE0 780 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 RHBDD1Q8TEB9 315 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 LRRC61Q9BV99 259 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 FRMD8Q9BZ67 464 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 NFKBIL1Q9UBC1 381 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 CNOT6Q9ULM6 557 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 PDE2AO00408 941 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 GIMD1P0DJR0 217 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 GRK6P43250 576 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 POLD2P49005 469 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 VPS41P49754 854 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 HK3P52790 923 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 C1orf61Q13536 156 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 WHAMMP3Q1A5X7 153 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 DOK6Q6PKX4 331 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 EID2Q8N6I1 236 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 COX14Q96I36 57 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 SPATA16Q9BXB7 569 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 TMEM98Q9Y2Y6 226 aa14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 OAS3Q9Y6K5 1087 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-201ENST00000368440 E7EVH7 732 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 H3BM21 787 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 FFAR2O15552 330 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 GPR39O43194 453 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 PSMD3O43242 534 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 CEACAM5P06731 702 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 APRTP07741 180 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 CA5AP35218 305 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 TERF1P54274 439 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 BASP1P80723 227 aaKnown RBP14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 TAF1AQ15573 450 aaPredicted RBP14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 PRRT3Q5FWE3 981 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 PPM1JQ5JR12 505 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 TEX35Q5T0J7 233 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 LMX1AQ8TE12 382 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 HIC2Q96JB3 615 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 CLPBQ9H078 707 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 DDX47Q9H0S4 455 aaKnown RBP14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 SUDS3Q9H7L9 328 aaPredicted RBP14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 ARFGAP3Q9NP61 516 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 MOSPD1Q9UJG1 213 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 NEU2Q9Y3R4 380 aa14.98□□□□□ -0.01
SMPDL3A-201ENST00000368440 SPAARA0A1B0GVQ0 90 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 PRSS38A1L453 326 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 ERI2A8K979 691 aaKnown RBP14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 GAPDHSO14556 408 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 AQP9O43315 295 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 SUN1O94901 812 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 RASGRP1O95267 797 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 KRT14P02533 472 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 LMAN1P49257 510 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 TUBB2AQ13885 445 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 TRAM1L1Q8N609 369 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 OR4K2Q8NGD2 314 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 OR13C4Q8NGS5 318 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 BRSK1Q8TDC3 778 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 LRRC45Q96CN5 670 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 PLEKHG4BQ96PX9 1271 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 TUBB2BQ9BVA1 445 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 SLC13A1Q9BZW2 595 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 SLC32A1Q9H598 525 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 CYP4F12Q9HCS2 524 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 IL26Q9NPH9 171 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 RAD18Q9NS91 495 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 TMPRSS11EQ9UL52 423 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 PCYT1BQ9Y5K3 369 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 GOLGA6L10A0A0M3HER8 536 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms